Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 438 a.a., outer membrane efflux protein from Azospirillum brasilense Sp245

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 91/405 (22%), Positives = 174/405 (42%), Gaps = 28/405 (6%)

Query: 48  SNPKLKVFQENREAATHDLRRARAGWLPRVDVRAGYGAEQYSDTTSRQSNKDDEFTERGD 107
           ++ +L+  +   + A + LR +  GW P + + A  G E    +T++ +   +       
Sbjct: 8   THDRLRGAEAAADGARNALRISHGGWFPTLSLSANGGRE----STTKPAGLPNTDMNASQ 63

Query: 108 ASAVLTQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLDAVLAHIEVLRQREIV-- 165
            SA  TQ +WD  AT++ +   +  L  AD  +    + L ++ + A+  ++R  +++  
Sbjct: 64  FSARATQLIWDFDATNADIRRAQVTLVRADIAVERTRQELLVEGLTAYASLVRAHQLLAF 123

Query: 166 -RLSEINVQQHQTILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESRSALEVAEAAY 224
            R SE N+++     G +  R + G     DV Q + +LA AQ+  V +  A + A++ +
Sbjct: 124 ARQSEDNIRRQT---GLEEVRLQEGFGFSTDVLQAKSQLAGAQARRVAAEEATQNAQSRF 180

Query: 225 KRLTGMEVPTELERAGIPDTA----PASFETALGASLTANPKI-------AAYQSDIQAA 273
           +   G  VP ++  A +        P S + A+  +   NP++       AA Q  + + 
Sbjct: 181 QAFFG-HVPFQVSNAQVLAMTRAGLPVSMDAAMEEARRHNPRLQELALTTAAAQEAVTSV 239

Query: 274 RGQEDLDKSRFHPNVYLEVGPSYKERVESSESYAWGTTAMMRVNWNIYDGGADVAAVRGS 333
           RG+        +P +   V  + K  V             ++V +++  G   + ++R +
Sbjct: 240 RGRT------LYPRIDGFVEHNIKRDVAGQSGRQNELLFKLQVTFSLNTGLTALNSIRLA 293

Query: 334 AARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQFLVG 393
            A +R +     +   T+ E  R +W+R  SA  Q        +      D    +  +G
Sbjct: 294 EADLRAADATWADQERTVLETVRNSWNRLESARAQVQLLNDQASLAAGFLDVARSERELG 353

Query: 394 QRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNLLAS 438
            RSL+D+L  E  L ++      A+       YRLLA  G L A+
Sbjct: 354 TRSLIDILSGETTLINARSDAAAAETELVLAGYRLLAAMGRLNAT 398