Pairwise Alignments

Query, 328 a.a., dnaJ domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 1  MTERDCRRILQVDDRAALDDVKRSYRRLAFALHPDLNPDKPDAARRFRQLNEAYVLLT-- 58
          M++RD   +L V   A+  D+K++Y+RLA   HPD N     AA +F+++ EAY +LT  
Sbjct: 1  MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60

Query: 59 ---RLYEERG-ASQSRKAGPASGGAAG 81
               Y++ G A+  + AG   GG  G
Sbjct: 61 QKKAAYDQYGHAAFEQGAGGFGGGGFG 87



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 60/224 (26%)

Query: 163 PDGSTSGAGADRTKRKAQEAYTEREDVLQDILRDPFARRVFE------------------ 204
           PD ++  AGA    ++ +EAY    D  +    D +    FE                  
Sbjct: 34  PDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADF 93

Query: 205 ---------DIYSQIRRTGGTTAERPPKKR---KLSLEWGDRS----------VAFDFTH 242
                    DI+   RR GG  A+R    R   +LSLE   R           V  D   
Sbjct: 94  GDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACD 153

Query: 243 GVAGAVRGWLRR---------QIDEEQ---TIHLPAANLLPGGRV-----RLQIRQGLSD 285
           G +GA +G   +         Q+   Q    +          G++      +   QG   
Sbjct: 154 G-SGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQ 212

Query: 286 EVRTVEMTLPPDFVVGRPLRLKGLGK--RIGPWQGDLYLRLLAK 327
           + +T+ + +P     G  +RL G G+   +G   GDLY+++  K
Sbjct: 213 KTKTLNVKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVK 256