Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 404 a.a., uncharacterized domain HDIG from Pseudomonas stutzeri RCH2

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 3/147 (2%)

Query: 213 SNLFSLV-IDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPL 271
           S L SL  + ++  +T  HS  V      LA + GL  D   +  +AGLLHDIGK+ +PL
Sbjct: 148 SALLSLARLKTKDEYTYMHSVAVCALMVALARQLGLPEDQVHEAGMAGLLHDIGKMAMPL 207

Query: 272 SILEKPGPLDAAEMCEMQLHAGRSKTILDAVPG--FDEVSRWGALHHERLDGSGYPFGLR 329
            +L KPG L   E   M+ H  R   +L A      D V      HHE+++G+GYP  L 
Sbjct: 208 DVLNKPGKLSDDEYMVMRSHPERGHAMLLAAQTAVSDAVLDVCLHHHEKVNGTGYPHRLE 267

Query: 330 GDELEVPSRIIAVADVFTAIAEDRPYR 356
           G+++   +R+ A+ DV+ AI  +RPY+
Sbjct: 268 GEQISRLARMGAICDVYDAITSNRPYK 294



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 28  HHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGL---DGLLFEQN---AD 81
           H + V      L  +LGL      E  ++ LLHD+G +++   +    G L +       
Sbjct: 166 HSVAVCALMVALARQLGLPEDQVHEAGMAGLLHDIGKMAMPLDVLNKPGKLSDDEYMVMR 225

Query: 82  AHARAGWALIGTCPRLA--AAGEVVLHHHAAWEDV-------ADDLDRAKRLGAIVHLAD 132
           +H   G A++         A  +V LHHH              + + R  R+GAI  + D
Sbjct: 226 SHPERGHAMLLAAQTAVSDAVLDVCLHHHEKVNGTGYPHRLEGEQISRLARMGAICDVYD 285

Query: 133 RL 134
            +
Sbjct: 286 AI 287