Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 380 a.a., Response regulator containing a CheY-like receiver domain and an HD-GYP domain from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 227 TATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGPLDAAEMC 286
           T  H   + E+A L+A   G   +  +++ +A  +HD+GK+G+P  IL KPG L   E  
Sbjct: 174 TGQHIIRIGESAALIAAALGQPAEWVERIRLAAPMHDVGKIGIPDHILLKPGTLTDLERK 233

Query: 287 EMQLHAGRSKTIL---DAVPGFDEVSRWGALHHERLDGSGYPFGLRGDELEVPSRIIAVA 343
            MQ H      IL   +  P  +  +     HHER DG+GYP GL+G+E+ + +R++A+ 
Sbjct: 234 IMQRHTQIGHAILRDGEESPLLEMAAEIALYHHERWDGTGYPHGLKGEEIPLAARVVALC 293

Query: 344 DVFTAIAEDRPYRRGMPLETA 364
           DV+ A+   RPY+     E A
Sbjct: 294 DVYDALRSPRPYKESWSKERA 314



 Score = 50.4 bits (119), Expect = 9e-11
 Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 20/214 (9%)

Query: 10  LVVAFSRALDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAIS--- 66
           ++ + SRA  +       H I +G  AA +   LG  A     + L+A +HDVG I    
Sbjct: 159 VICSLSRAAQYKDDETGQHIIRIGESAALIAAALGQPAEWVERIRLAAPMHDVGKIGIPD 218

Query: 67  ---LKTGLDGLLFEQNADAHARAGWALIGT---CPRLAAAGEVVLHHHAAWEDV------ 114
              LK G    L  +    H + G A++      P L  A E+ L+HH  W+        
Sbjct: 219 HILLKPGTLTDLERKIMQRHTQIGHAILRDGEESPLLEMAAEIALYHHERWDGTGYPHGL 278

Query: 115 -ADDLDRAKRLGAIVHLADRLDVQLRRSEPLAPQLTRAFTKLEPGRGRLFSPEHLDALRD 173
             +++  A R+ A+  + D L       E  + +  +A+  +    G  F P  +D L  
Sbjct: 279 KGEEIPLAARVVALCDVYDALRSPRPYKESWSKERAQAY--ICEQAGLYFDPALVDVLNG 336

Query: 174 MLDD-PQVREGVEDPSVGLHS-GPGARLEEEILD 205
           M      +++ + DP     S G      E ++D
Sbjct: 337 MFQQIEDMQDSLADPLAQTASVGAEQEYSESVVD 370