Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 378 a.a., response regulator from Xanthomonas campestris pv. campestris strain 8004

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 3/169 (1%)

Query: 220 IDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGP 279
           I+ R   T+     ++  A L+A + GL  +  + + +A  LHD+GK+ +P S+L KPG 
Sbjct: 189 IEYRDGGTSAFLERMSHVAGLVAEQLGLSEEEVRIIEMAAPLHDMGKIAIPDSVLLKPGK 248

Query: 280 LDAAEMCEMQLHAGRSKTILDAVPG-FDEVSRWGAL-HHERLDGSGYPFGLRGDELEVPS 337
           L   EM  M+ H      +L      F +V    AL HHER DGSGYP GL G+ + + +
Sbjct: 249 LTEDEMNVMKRHPRIGYELLSGSQNRFIQVGALIALRHHERYDGSGYPDGLVGEAIPLEA 308

Query: 338 RIIAVADVFTAIAEDRPYRRGMPLETACGVLRGQVRDGLLDGDLAGLLL 386
           RI+AVADVF A+   RPY+    ++ A   L  Q R  L D      LL
Sbjct: 309 RIVAVADVFDALLSARPYKEAWTMDAALAYLYAQ-RGRLFDPRCVDALL 356



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 15  SRALDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGL--- 71
           +RA+++     S     + + A  + E+LGL   +   + ++A LHD+G I++   +   
Sbjct: 186 ARAIEYRDGGTSAFLERMSHVAGLVAEQLGLSEEEVRIIEMAAPLHDMGKIAIPDSVLLK 245

Query: 72  DGLLFEQNADA---HARAGWALI-GTCPRLAAAGEVV-LHHHAAWED-------VADDLD 119
            G L E   +    H R G+ L+ G+  R    G ++ L HH  ++        V + + 
Sbjct: 246 PGKLTEDEMNVMKRHPRIGYELLSGSQNRFIQVGALIALRHHERYDGSGYPDGLVGEAIP 305

Query: 120 RAKRLGAIVHLADRLDVQLRRSEPLAPQLTRAFTKLEPGRGRLFSPEHLDAL 171
              R+ A+  + D L     R    A  +  A   L   RGRLF P  +DAL
Sbjct: 306 LEARIVAVADVFDAL--LSARPYKEAWTMDAALAYLYAQRGRLFDPRCVDAL 355