Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 460 a.a., HD-GYP domain protein from Marinobacter adhaerens HP15

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 1/150 (0%)

Query: 220 IDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGP 279
           + ++  +TA HS  V+  +     + GL  +  + + +AGLLHDIGK  VP+ +L+KPGP
Sbjct: 196 LKNKDKYTAEHSLNVSILSAAFGKKLGLLEEEIRSLGLAGLLHDIGKAKVPVDLLQKPGP 255

Query: 280 LDAAEMCEMQLHAGRSKTILDAVPGFDEVSRWGAL-HHERLDGSGYPFGLRGDELEVPSR 338
           L   E   MQ HA   + +L A+P     +   A  HHERLDG GYP GL   ++   ++
Sbjct: 256 LTPEEHGIMQNHANWGRDMLMALPRVVHAAVDVAYNHHERLDGRGYPRGLVDSQIPYFAK 315

Query: 339 IIAVADVFTAIAEDRPYRRGMPLETACGVL 368
           I+A+ D + AI  +R Y R      A  ++
Sbjct: 316 IVAIVDTYDAITSNRAYDRARSSREALEII 345



 Score = 37.7 bits (86), Expect = 7e-07
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 18  LDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGL----DG 73
           L +  +  ++H ++V   +A  G++LGL   +   L L+ LLHD+G   +   L      
Sbjct: 196 LKNKDKYTAEHSLNVSILSAAFGKKLGLLEEEIRSLGLAGLLHDIGKAKVPVDLLQKPGP 255

Query: 74  LLFEQNADAHARAGWA--LIGTCPRLA-AAGEVVLHHH 108
           L  E++      A W   ++   PR+  AA +V  +HH
Sbjct: 256 LTPEEHGIMQNHANWGRDMLMALPRVVHAAVDVAYNHH 293