Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 401 a.a., phosphodiesterase from Herbaspirillum seropedicae SmR1

 Score =  104 bits (259), Expect = 5e-27
 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 1/134 (0%)

Query: 226 FTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGPLDAAEM 285
           +T  HS  V      LA + G+     ++  +AGLLHD+GK+ VPL IL KP  L   E 
Sbjct: 161 YTYLHSVAVCAMMISLANQLGMTPQQTKQAGMAGLLHDVGKMAVPLDILNKPAKLTEEEF 220

Query: 286 CEMQLHAGRSKTILDAVPGFDEVSRWGAL-HHERLDGSGYPFGLRGDELEVPSRIIAVAD 344
             +++H  +   IL  + G  EV+   +L HHE++DGSGYPF L+ D + + +++ AV D
Sbjct: 221 ASVRMHTVQGHGILQQIEGIGEVALDVSLHHHEKIDGSGYPFNLKADSISIMAKMGAVCD 280

Query: 345 VFTAIAEDRPYRRG 358
           V+ AI  +RPY+ G
Sbjct: 281 VYDAITSNRPYKAG 294



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 14/121 (11%)

Query: 28  HHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGLDGLLFEQNADAHARAG 87
           H + V      L  +LG+  +   +  ++ LLHDVG +++   +     +   +  A   
Sbjct: 165 HSVAVCAMMISLANQLGMTPQQTKQAGMAGLLHDVGKMAVPLDILNKPAKLTEEEFASVR 224

Query: 88  WALI---GTCPRLAAAGEVV----LHHHAAWED-------VADDLDRAKRLGAIVHLADR 133
              +   G   ++   GEV     LHHH   +         AD +    ++GA+  + D 
Sbjct: 225 MHTVQGHGILQQIEGIGEVALDVSLHHHEKIDGSGYPFNLKADSISIMAKMGAVCDVYDA 284

Query: 134 L 134
           +
Sbjct: 285 I 285