Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 406 a.a., phosphodiesterase from Herbaspirillum seropedicae SmR1

 Score =  100 bits (248), Expect = 1e-25
 Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)

Query: 215 LFSLV-IDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSI 273
           + SLV + +   +T  HS  V      LA + GL     Q+  +AGLLHDIGK+ VP SI
Sbjct: 152 MISLVRLKTADNYTYMHSVAVCAMMISLADQLGLSAQERQQAGMAGLLHDIGKMTVPPSI 211

Query: 274 LEKPGPLDAAEMCEMQLHAGRSKTILDAVPGFDEVSRWGAL-HHERLDGSGYPFGLRGDE 332
           L KP  L   E   +Q H      +L  +PG  +     +L HHE++DG+GYP+ L G +
Sbjct: 212 LNKPSKLTEEEFVSVQSHPLAGHRLLQELPGIGDAPLDVSLHHHEKMDGTGYPYKLSGRD 271

Query: 333 LEVPSRIIAVADVFTAIAEDRPYRRG 358
           + + +R+ A+ DV+ AI  DRPY+ G
Sbjct: 272 ISMTARMGAICDVYDAITSDRPYKSG 297



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 28  HHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGL---DGLLFEQ---NAD 81
           H + V      L ++LGL A++R +  ++ LLHD+G +++   +      L E+   +  
Sbjct: 168 HSVAVCAMMISLADQLGLSAQERQQAGMAGLLHDIGKMTVPPSILNKPSKLTEEEFVSVQ 227

Query: 82  AHARAGWALIGTCPRLAAAG-EVVLHHHAAWEDV-------ADDLDRAKRLGAIVHLADR 133
           +H  AG  L+   P +  A  +V LHHH   +           D+    R+GAI  + D 
Sbjct: 228 SHPLAGHRLLQELPGIGDAPLDVSLHHHEKMDGTGYPYKLSGRDISMTARMGAICDVYDA 287

Query: 134 L 134
           +
Sbjct: 288 I 288