Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 345 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  118 bits (296), Expect = 2e-31
 Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 2/151 (1%)

Query: 223 RSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGPLDA 282
           R P T  H + +A  AR++A R GL     + +  A  +HDIGK+G+P  IL KPG LD 
Sbjct: 164 RDPETGEHLTRMANYARIIAARMGLDSQQQELLLNAAPMHDIGKMGIPDHILLKPGRLDE 223

Query: 283 AEMCEMQLHAGRSKTILDAVPG--FDEVSRWGALHHERLDGSGYPFGLRGDELEVPSRII 340
            E+  M++HA     IL A P       S+    HHE+ DGSGYP GL+G+++ +  RI+
Sbjct: 224 EELKVMRMHARIGADILVASPSPLLQTASQIALTHHEKWDGSGYPNGLKGEQIPLYGRIV 283

Query: 341 AVADVFTAIAEDRPYRRGMPLETACGVLRGQ 371
           AVADVF A+   RPY+ G  LE A   LR Q
Sbjct: 284 AVADVFDALTSSRPYKPGWSLERASQYLREQ 314



 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 15/177 (8%)

Query: 8   IDLVVAFSRALDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISL 67
           +D V   +RA  +      +H   +  +A  +  R+GLD++ +  LL +A +HD+G + +
Sbjct: 151 LDSVDLLARAAGYRDPETGEHLTRMANYARIIAARMGLDSQQQELLLNAAPMHDIGKMGI 210

Query: 68  KTGL---DGLLFEQNADA---HARAGWALI--GTCPRLAAAGEVVLHHHAAWEDVADDL- 118
              +    G L E+       HAR G  ++     P L  A ++ L HH  W+       
Sbjct: 211 PDHILLKPGRLDEEELKVMRMHARIGADILVASPSPLLQTASQIALTHHEKWDGSGYPNG 270

Query: 119 ---DRAKRLGAIVHLADRLDVQLRRSEPLAP--QLTRAFTKLEPGRGRLFSPEHLDA 170
              ++    G IV +AD  D  L  S P  P   L RA   L    G  F P  ++A
Sbjct: 271 LKGEQIPLYGRIVAVADVFDA-LTSSRPYKPGWSLERASQYLREQSGAHFDPRCVEA 326