Pairwise Alignments

Query, 810 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 795 a.a., PAS domain S-box protein from Rhodopseudomonas palustris CGA009

 Score =  119 bits (299), Expect = 5e-31
 Identities = 114/369 (30%), Positives = 167/369 (45%), Gaps = 39/369 (10%)

Query: 465 LQAVFDGVGDPLALLDAKGRLV---------IANDGARRLATELGGTDGYGNLLAPLLGT 515
           L+A+ +       LLD KGRL+         IA + A+ L      T  +    AP   +
Sbjct: 294 LRAILETTNQYQGLLDLKGRLLYVNGTALAGIAAEPAQVLGALFWKTPWFE--AAPEAAS 351

Query: 516 SCETEIEAVAHGG-AVLHREVQLDDG-RSFSVQLYPLPRVEERPGRVAAYIHETTAERRM 573
           + E        G  A L  E+QL  G R     L P+   +     V A   ++T  RR 
Sbjct: 352 AIERAFRTARVGEIAKLDLELQLPAGTRHIDFSLRPVADTQGGVMAVLAEGIDSTERRRN 411

Query: 574 LARVNQSERMATVGKLSAGLAHEINNPLGVILCYAELLRQGATAEQQDD--LGIILRHTR 631
              + Q+++M  VG+L+ G+AH+ NN L +I    + LR+    E++    +  I     
Sbjct: 412 EEALRQAQKMEAVGQLTGGVAHDFNNLLTIIRSAVDFLRRRDLPEERRRRYVDAISDTAD 471

Query: 632 QAQKVLRDLLDFARPKAFEGVLTDAAGVARRMAEVFGPQAAHRGGRVQVEAEDGLPP--- 688
           +A K+   LL FAR +    V+ D A   + +A +  P     G RV+++ + G  P   
Sbjct: 472 RASKLTGQLLAFARRQPLSPVVFDVAAQIQSIANLIRPLV---GSRVEIDVDTGSGPNYA 528

Query: 689 -ARIGEQALEQILSNLLLNAIDALTGEDGL------------IRIRLRSHGLNVRIDVED 735
            A +G+   E  L NL +N  DA+ GE  L            +R +    G  V I V D
Sbjct: 529 IADVGQ--FETALVNLAVNGRDAMNGEGRLSIALRRVDEIPPVRSQPARPGEFVAISVTD 586

Query: 736 NGLGVETDALQRVFDPFYTTKET--GTGLGLSVVYGIVTDAGGTAEVLQSHELGGAVFRV 793
           +G G+    L  +F+PF+TTKE   GTGLGLS  +G    +GG   V QS    GA F +
Sbjct: 587 SGSGIALTNLDVIFEPFFTTKEVGRGTGLGLSQAFGFAKQSGGEISV-QSTLGEGATFTI 645

Query: 794 TLPAGTAPE 802
            LP   APE
Sbjct: 646 YLPQAQAPE 654