Pairwise Alignments

Query, 810 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (317), Expect = 4e-33
 Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 23/261 (8%)

Query: 552 RVEERPGRVAAYIHETTAERRMLARVNQ----SERMATVGKLSAGLAHEINNPLGVILCY 607
           +VEER   +     E      +L    Q    +E++  +G+L+AG+AHEINNP  VIL  
Sbjct: 430 KVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEINNPTAVILGN 489

Query: 608 AELLRQ--GATAEQ-QDDLGIILRHTRQAQKVLRDLLDFARPKAFEGVLT--DAAGVARR 662
            ELL+   G  AE  ++++ I++    +   ++R LL ++RP  F   L       +   
Sbjct: 490 MELLKSELGDKAEDVEEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEE 549

Query: 663 MAEVFGPQAAHRGGRVQVEAEDGLPPARIGEQALEQILSNLLLNAIDALTGEDGLIRIRL 722
           MA +    +  +   V ++  +   P  +    L Q+L NL++NA  A+ G+    RI +
Sbjct: 550 MA-ILVRHSIKKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAMDGQG---RIWI 605

Query: 723 RSHG-------LNVRIDVEDNGLGVETDALQRVFDPFYTTKETGTGLGLSVVYGIVTDAG 775
           R++        + V+I+VED G G+  + L R+FDPFYTT++ GTGLGLS+ YGI+   G
Sbjct: 606 RTYDWVQGGEPIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQDGTGLGLSLSYGIIKRIG 665

Query: 776 GTAEVLQSHELG-GAVFRVTL 795
           GT EV  S  +G G +F + L
Sbjct: 666 GTIEV--SSTVGKGTLFTIGL 684



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 269 GLQEGDEVEEIVERFEDVAHHLAEARNQLQAYADNLRDMVDARTEALSQEAAERRADVSL 328
           GL+  +E+  + E+F+ +   L    +Q+QA A+ L   V+ RT +L ++  E + +V+L
Sbjct: 392 GLERDNELANLAEQFDRMLDLLQRRNSQIQAAAEQLEVKVEERTRSLQEKTEELQRNVAL 451

Query: 329 FVQLLEDMRGTHTRERL 345
              L E  +   T E+L
Sbjct: 452 ---LNETRQQLVTNEKL 465