Pairwise Alignments

Query, 579 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 318 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 8/195 (4%)

Query: 259 AIIIGMLIANTVGTPNFIKPALQVEYYIKTGLVLLGAEVLFDKIIAIGIPGIFVAWVVTP 318
           A++IG  +A+    P+ +      +  +   ++ LG  +  D  I+     I +      
Sbjct: 37  ALVIGFTLASLGLVPHNLDIGALTKKLLAYAIIGLGFGIQLDAAISASSQNIGLILGSIV 96

Query: 319 IVLICTFIFGQKILKMPSKTLNMVISADMSVCGTSAAIATAAACRAKKEELTLSIGLSLV 378
             L+     G ++L++ +K  +M+ S   ++CG SA  A A A +A  ++  +++    V
Sbjct: 97  FTLLLGTALG-RLLRVDAKLSHMIASGT-AICGGSAIAAVAPAIKADSQDTAIALATVFV 154

Query: 379 FTAIMMIVMPAFIKSVGMPQILGGAWMGGTIDATGAVAAAGAFLGEKALYVAATIKM--- 435
             +I + + PA    + + Q   G W    I  T +V  A +  G++AL  A T+K+   
Sbjct: 155 LNSIALFLFPALGHLLQLSQYHFGVWSAIAIHDTSSVVGAASAYGDEALRTATTLKLARA 214

Query: 436 ---IQNVLIGVVAFG 447
              +   L+  +AFG
Sbjct: 215 LWIVPVALVSAMAFG 229