Pairwise Alignments

Query, 579 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 336 a.a., conserved hypothetical protein with a conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 33/330 (10%)

Query: 231 GVFVVAVI---AQMMGHQSTMKYWGIGTEAWAIIIGMLIANTVGT--PNFIKPALQV--E 283
           GV ++A+    A  +G  S ++          II+GML AN++    P    P +Q   +
Sbjct: 4   GVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQFCSK 63

Query: 284 YYIKTGLVLLGAEVLFDKIIAIGIPGIFVAWVVTPIVLICTFIFGQKILKMPSKTLNMVI 343
             ++ G++L G  + F  ++AIG+P + +  V+   V IC  I+  K+LKM  + + ++ 
Sbjct: 64  KILRIGIILYGFRLTFQDVMAIGLPAMLID-VIIVAVTICGGIYLGKLLKM-DRGIALLT 121

Query: 344 SADMSVCGTSAAIATAAACRAKKEELTLSIGLSLVFTAIMMIVMPAFIKS--VGMPQILG 401
           S    +CG +A +   +  +AK  +  +S+   ++F  I M + P   ++    +     
Sbjct: 122 SIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTISMFLYPFLYRNGFCALTPDQM 181

Query: 402 GAWMGGTIDATGAVAAAGAFLGEKALYVAATIKMIQNVLIGVVAFGVAVYWCARV---EC 458
           G + G T+     V  AG  +G      A  +KMI+ V++ V    +  Y  AR    + 
Sbjct: 182 GIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIR-VMMLVPVLLITTYLVARARKRQV 240

Query: 459 TSGRSVGWIEIWNRFPKFVLGFLTASIIFSIISGSLGSDMSQIMVNQGVLKGLSSPLRGW 518
             G+    I +    P F +GF+          G +  +   ++  Q ++ G+++ L  +
Sbjct: 241 QKGQKFQKIAV----PWFAIGFM----------GVIAFNSFDLLPAQ-LVAGINT-LDTF 284

Query: 519 FFCLAFTAIGLATNFRELAHYFKGGKPLIL 548
              +A TA+G  T+  +      G KP +L
Sbjct: 285 LLTMAMTALGTETSIDKFRK--AGAKPFVL 312