Pairwise Alignments

Query, 834 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 2e-43
 Identities = 100/268 (37%), Positives = 150/268 (55%)

Query: 561 EVVEVASQVAEASASIEEQTRQVLSSADSQRHLIAESVGAIGQMNDTIMEVARSAALASQ 620
           E V+ AS VAEA+  I     +   +  SQR  +++   A+ QM  T+ +VA  A   ++
Sbjct: 260 ESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTAR 319

Query: 621 QAGSGQTKAQEGSRIVSDAVQAIGTVSQLSGVLRTNLTELGGQAESIGQIMNVISDIADQ 680
                  +A  G + V  +V +I  +S   GV    + +L      I ++ +VIS I++Q
Sbjct: 320 DTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQ 379

Query: 681 TNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATQEVRRSIETIQSGAARNISS 740
           TNLLALNAAIEAARAG+ GRGFAVVADEVR LA +T ++T E++  I  +Q  A    S+
Sbjct: 380 TNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASA 439

Query: 741 MEEVASAVGQATVLAERSGTALREIVALVNDTSSQVTAIATAAEEQSASSEEIKRSVEQV 800
           M++  +    +   AE +G+ L  IV  +   S + T IATAAEEQSA +EE+ R+V  +
Sbjct: 440 MQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGI 499

Query: 801 SALSEETAQRMEDAARAVNDLTGLAQRL 828
           +  + E +Q     A     L  L+++L
Sbjct: 500 NDAALEMSQAATYLAEESEKLADLSRQL 527



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 22/154 (14%)

Query: 664 AESIGQIMNVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATQEV 723
           + ++ Q ++ I D+  +     L A I      E G    +VA  +        +A  E 
Sbjct: 206 SRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELG----IVAQRINNSIAAVHDALVES 261

Query: 724 RRSIETIQSGAARNISSMEEVASAVGQATVLAERSGTALREIVALVNDTSSQVTAIA--- 780
            +S  ++   A R  SS EE + AV     +++R    L ++   +N  ++ V  +A   
Sbjct: 262 VQSASSVAEAAIRIASSAEETSQAV-----VSQRD--QLSQLATAMNQMTATVADVAGHA 314

Query: 781 --------TAAEEQSASSEEIKRSVEQVSALSEE 806
                    A++E +   +++  SV+ + ALS E
Sbjct: 315 EDTARDTLDASKEANLGDKDVHSSVDSIRALSVE 348



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 14/99 (14%)

Query: 721 QEVRRSIETIQSGAARNISSMEEVASAVGQATVLAERSGTALREIVALVNDTSSQVTAIA 780
           Q +  SI  +      ++ S   VA A  +    AE +  A       V     Q++ +A
Sbjct: 245 QRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQA-------VVSQRDQLSQLA 297

Query: 781 TAAEEQSASSEEIKRSVEQVSALSEETAQRMEDAARAVN 819
           TA  + +A+       V  V+  +E+TA+   DA++  N
Sbjct: 298 TAMNQMTAT-------VADVAGHAEDTARDTLDASKEAN 329



 Score = 29.3 bits (64), Expect = 6e-04
 Identities = 21/109 (19%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 730 IQSGAARNISSMEEVASAVGQATVLAERSGTALREIVALVNDTSSQVTAIATAAEEQSAS 789
           I     + + ++++V   V Q  + A+       E+  +    ++ + A+  A  E   S
Sbjct: 205 ISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQS 264

Query: 790 SEEIKRSVEQVSALSEETAQ-------RMEDAARAVNDLTG-LAQRLGH 830
           +  +  +  ++++ +EET+Q       ++   A A+N +T  +A   GH
Sbjct: 265 ASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGH 313