Pairwise Alignments

Query, 214 a.a., AT-rich DNA-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 220 a.a., putative DNA binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (348), Expect = 7e-38
 Identities = 74/206 (35%), Positives = 117/206 (56%)

Query: 9   IPRATIQRLAVYVQVLENLQREGVEVISSEPLAKACNVNASQIRKDLAYFGEFGVRGVGY 68
           +P  T++RL  Y+  ++ L++ G   +SS  ++K  N++ASQI KDL+Y    G   VGY
Sbjct: 15  VPEPTLRRLPWYLSNVKLLKQRGERFVSSTQISKEINIDASQIAKDLSYVNISGRTRVGY 74

Query: 69  YVKSLIESITSALGVNREWRTVLVGVGNLGRALLNHKEFKLRGFHIVGAFDCDPFKIGEE 128
            V +LIE +   LG     +  L GVG+LG ALL     K  G  IV AFD DP  +G  
Sbjct: 75  EVDALIEVLEHFLGFTEIHKAFLFGVGSLGGALLQDSGLKHFGLEIVAAFDVDPTLVGTN 134

Query: 129 ISGLEVICTKRLKERVADLNVEIGIITTPPERAQRAANHLVDAGIKGILNYAPARISVPD 188
           ++G+ +  +    +++ + +V+IG++T P E AQ   + +VD GIK + N+ P RI VP+
Sbjct: 135 LNGIPIYHSDDFLKKMEEYDVQIGVLTVPIEIAQCITDMMVDGGIKAVWNFTPFRIRVPE 194

Query: 189 DVFVEYVDFFHHLYALSFNITFSRNK 214
           D+ V+    + HL  +   + F+  K
Sbjct: 195 DIVVQNTSLYAHLAVMFNRLNFNEIK 220