Pairwise Alignments

Query, 220 a.a., ribonuclease HII (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 240 a.a., Ribonuclease HII (EC 3.1.26.4) from Xanthomonas campestris pv. campestris strain 8004

 Score =  149 bits (377), Expect = 3e-41
 Identities = 93/205 (45%), Positives = 114/205 (55%), Gaps = 11/205 (5%)

Query: 17  VFAGIDEAGRGCLAGPVVAAAVIL-PQEYALPGLTDSKKLTAARRESLAEGIRSCAVTWG 75
           + AG+DEAGRG LAGPV  AAV+  P +  + GL DSK+L+A RRE L   I   A+ W 
Sbjct: 32  LIAGVDEAGRGPLAGPVAVAAVVFDPAKPRINGLDDSKQLSAERREQLYARIVDRALAWS 91

Query: 76  IGVVWPRDIDRINILQATFRAMARAVRVLRQPPPAILIDGDKTLPPHVLTSLSCDGHLPT 135
           + ++   +IDRINI QAT   M RAV  +        IDG++     V   L C      
Sbjct: 92  VVLIDSEEIDRINIYQATMLGMRRAVEGVAHVAGFARIDGNR-----VPKGLPCPAE--- 143

Query: 136 QRAIIGGDGCIPAISAASILAKTFRDRLMDTLDRRYHGYGFAKHKGYGTAEHLAAIAAHG 195
             A+IGGD    AI AASI+AK  RDRLM  L  ++  Y F  HKGY T  HLAA+  HG
Sbjct: 144 --ALIGGDALDRAIMAASIVAKVTRDRLMRELHAQHPQYRFDLHKGYSTPAHLAALQTHG 201

Query: 196 PCAQHRLTFRGVRPNPAAEEQLTLW 220
           PC QHR +F  VR     E   T W
Sbjct: 202 PCPQHRRSFAPVRRALGLETAQTAW 226