Pairwise Alignments

Query, 220 a.a., ribonuclease HII (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 215 a.a., RNase HII from Synechococcus elongatus PCC 7942

 Score =  151 bits (382), Expect = 8e-42
 Identities = 89/190 (46%), Positives = 113/190 (59%), Gaps = 14/190 (7%)

Query: 19  AGIDEAGRGCLAGPVVAAAVILPQEYALP----GLTDSKKLTAARRESLAEGIRSCAVTW 74
           AG+DE GRGCL GPVV AAVILP+    P    G+TDSK+L+  +R+ L   I   A+  
Sbjct: 22  AGVDEVGRGCLFGPVVTAAVILPETAIAPLQQAGVTDSKRLSQRQRQQLYPLICEVALAT 81

Query: 75  GIGVVWPRDIDRINILQATFRAMARAVRVLRQPPPAILIDGDKTLPPHVLTSLSCDGHLP 134
           G G+    +I+R NILQATF AM RA+  L +P    LIDG++ +P              
Sbjct: 82  GWGLASVAEIERWNILQATFLAMRRAIAKLDRPISRCLIDGNQQVPQLTYP--------- 132

Query: 135 TQRAIIGGDGCIPAISAASILAKTFRDRLMDTLDRRYHGYGFAKHKGYGTAEHLAAIAAH 194
            Q  +I GD     I+AASILAK +RDRL++ LD RY GY   +HKGYGTA+H  AI   
Sbjct: 133 -QTTVIQGDRHCITIAAASILAKVWRDRLIERLDERYPGYALGRHKGYGTAQHRQAILQL 191

Query: 195 GPCAQHRLTF 204
           GP   HR+ F
Sbjct: 192 GPTPLHRIRF 201