Pairwise Alignments

Query, 220 a.a., ribonuclease HII (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 209 a.a., ribonuclease HII (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  161 bits (408), Expect = 7e-45
 Identities = 95/190 (50%), Positives = 118/190 (62%), Gaps = 6/190 (3%)

Query: 19  AGIDEAGRGCLAGPVVAAAVILPQEYALPGLTDSKKLTAARRESLAEGIRSCAVTWGIGV 78
           AG+DE GRG L G VV AAVIL     + GL DSKKLT  RRE+L + I   A+++ +G 
Sbjct: 21  AGVDEVGRGPLVGDVVTAAVILDPNRPILGLNDSKKLTEKRREALFDEICEKALSFHVGR 80

Query: 79  VWPRDIDRINILQATFRAMARAVRVLRQPPPAILIDGDKTLPPHVLTSLSCDGHLPTQRA 138
             P +ID +NIL AT  AM RAV  L+  P  +L+DG+++ P      LS   H     +
Sbjct: 81  ASPAEIDELNILHATMLAMQRAVSGLKLTPALVLVDGNRS-PAFTHQGLSLASH-----S 134

Query: 139 IIGGDGCIPAISAASILAKTFRDRLMDTLDRRYHGYGFAKHKGYGTAEHLAAIAAHGPCA 198
           II GDG I +ISAASI+AK  RDR MD LD  Y  YGFAKHKGY T  H  AIA HG   
Sbjct: 135 IIKGDGLIASISAASIIAKVTRDREMDALDAAYPQYGFAKHKGYPTKAHFEAIAEHGVFD 194

Query: 199 QHRLTFRGVR 208
           Q+R +F+ V+
Sbjct: 195 QYRKSFKPVK 204