Pairwise Alignments

Query, 701 a.a., AsmA family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 604 a.a., AsmA protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 95.9 bits (237), Expect = 5e-24
 Identities = 98/412 (23%), Positives = 178/412 (43%), Gaps = 32/412 (7%)

Query: 5   MRFALFTFAAIIAIILFVVMAARLAFDPEALRNRAATALAEVTGRSVSISGPVTLGLWPR 64
           M+   + FA I AI + VV+   L FDP   +     A+ E TGR + I  P++   +P 
Sbjct: 1   MKLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPS 60

Query: 65  LAVDFEGLAVAPPEGFADASPLLTIGKADASLRIIPLFSRRMEFDHIRLEGLHINLVRDA 124
           + +   G++++ PEGF +A  ++ + +  A ++++PL SR ++ D +RL+G  + LV   
Sbjct: 61  IGIRLAGVSLSNPEGFKEAH-MMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTK 119

Query: 125 DGNGNWTPPAGRPIPPPVPSEKDSGATPSAMPDVPRPAFSLQRLELADATLSLRDIATGE 184
            G  +     G       P++   G   +A+        S+  + ++D +++L D A G 
Sbjct: 120 QGKSSLDGLTGNTTSADKPADVKQGPGLNAI--------SIGGINISDTSITLIDEAAGS 171

Query: 185 SIRARDIDFVADFDAEGKAAVGLSLVLAGERPTFSTGLALDATVT-PRADGSVSLELAPL 243
           S               GKAA  L+     + P        +AT+T   A  ++SL    L
Sbjct: 172 SQTFTLSSLTLGEFTPGKAA-PLAFAFGADLPDMKVKGEGEATLTVSEAFNALSLVGLNL 230

Query: 244 AITPHSGVIPAAVGQTQLRGRLNIIPAKEGQPARLTIEGMNLTAPFMTATVDGSLSAARE 303
            +      +P      +  G  ++  A E + A+LT++ + L    M     G+++A   
Sbjct: 231 EVNAQGNSLPKGAVTVEFAGGADV--ALEAKTAKLTVDKLTL----MDIEGKGAIAANYG 284

Query: 304 ASLSFALEGSPRKGLAAFGILLDTRATDALDKATAKGD---VNVAGQKLQLSGMDARIDS 360
             + F           AFG  +D  A    +K+  K D    + A ++  LSGM A +D+
Sbjct: 285 KKVPFV------DVELAFG-AIDVDAILGTEKSQTKADSTAPDTAQKEPDLSGMKA-VDA 336

Query: 361 TTFKGDVLIPLSG----DTPVKGTVALGDIDIDRYLPGKDAHKMKSSGTASG 408
                   + ++G    D  ++  +A G + +D         K+ +S T  G
Sbjct: 337 KLKLDIAAVKVAGLSTADWALRANLAGGVLKVDELKASLYGGKVGASATLDG 388



 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 107/470 (22%), Positives = 181/470 (38%), Gaps = 73/470 (15%)

Query: 278 LTIEGMNLTAPFMTATVDGSLSAAREASLSFALEGSPRKGLAA-----FGILLDTRATDA 332
           ++I G+N++   +T  +D +  +++  +LS    G    G AA     FG  L       
Sbjct: 150 ISIGGINISDTSITL-IDEAAGSSQTFTLSSLTLGEFTPGKAAPLAFAFGADLPDMKVKG 208

Query: 333 LDKATAKGDVNVAGQKLQLSGMDARIDS---TTFKGDVLIPLSGDTPVKGTVALGDIDID 389
             +AT    V+ A   L L G++  +++   +  KG V +  +G   V        + +D
Sbjct: 209 EGEATLT--VSEAFNALSLVGLNLEVNAQGNSLPKGAVTVEFAGGADVALEAKTAKLTVD 266

Query: 390 RY----LPGKDAHKMKSSGTASGPPSDQPKADAPPASPTSD--------KASGKPAATKD 437
           +     + GK A        A+      P  D   A    D        K+  K  +T  
Sbjct: 267 KLTLMDIEGKGA-------IAANYGKKVPFVDVELAFGAIDVDAILGTEKSQTKADSTAP 319

Query: 438 DTV-----LATLRKMHLDMDISCTRLSVSGFVMHDIATRLTAKAGLFTASPLQCRLYGGP 492
           DT      L+ ++ +   + +    + V+G    D A R     G+     L+  LYGG 
Sbjct: 320 DTAQKEPDLSGMKAVDAKLKLDIAAVKVAGLSTADWALRANLAGGVLKVDELKASLYGGK 379

Query: 493 TRGKASVDIRTDMPSYALTVDASGVDA------GALVAALTGKRTFDAKADVKGDTRAAG 546
               A++D R     Y+     +GV         A V  L G   FD +       + AG
Sbjct: 380 VGASATLDGRKVPAVYSFNKAITGVQILPLLKDAAEVDLLAGTANFDIQG------KGAG 433

Query: 547 TGTSDIMRTLSGRARLVARDIVLHEGDAVPK-----------DASATQGKTDAKR-FDLL 594
               +I R L+   +    D  L+ G  VP+           D +A  G  + K  F  L
Sbjct: 434 LLADNIKRNLNANGKFEVADGALY-GVNVPQMIRDAQAKLKGDLNAAAGGEEKKTDFSSL 492

Query: 595 TGTFEADKGVIRNDDLVVRGPSANAEAKGIIDLPGDNIGY-MATLHLKGLP--------- 644
           TG+     G   N DL++  P      +G  DL  + + Y +AT  +  L          
Sbjct: 493 TGSLNIAAGKANNPDLLMLSPLLRISGQGGADLMAETLDYKLATKVVGSLEGQGGDTALA 552

Query: 645 --DIPIRIHGRLSDPQYGVDPARMVVNTLK-EAVKVIEKPAEAGGKAVQG 691
             +IP+ I G  ++P++ +D   ++   LK E  K+ +K  ++  K + G
Sbjct: 553 GIEIPLAITGSFTEPKFALDTEALLKGQLKGETDKLKDKLKDSLFKKLGG 602