Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

 Score =  189 bits (480), Expect = 1e-52
 Identities = 125/361 (34%), Positives = 171/361 (47%), Gaps = 22/361 (6%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGL------HARFIPPTGH----DPVPDIRAMCDR 52
           + VAMSGG DS     LLK +G  V G+      H   +   G       + D R +C+ 
Sbjct: 15  VVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCET 74

Query: 53  LGVDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLA 112
           +G+  +V+D    F E V+ PF E Y+ G TP PC  CN T+KF  L   A  +GA  LA
Sbjct: 75  IGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGADALA 134

Query: 113 TGHYARLLRHPR----WGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRG 168
           TGHY R    P+        L R  D  +DQSYFL      +++   FPLG   K   R 
Sbjct: 135 TGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPKSETRA 194

Query: 169 ELARRSIVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGLWQY 228
                 +V    ++SQ+ICFVP   Y   +   +      G IV   GR +G+H G+  Y
Sbjct: 195 LAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLDGRVLGAHEGILHY 254

Query: 229 TEGQRKGLGIAWHEPLYVVGKDMENNMLLVGGREALASPGCVAEEVNLLVPYEDWPA--- 285
           T GQR+G+G+A  EPLYVV  D  +  ++VG +EAL +      +VN L   E   A   
Sbjct: 255 TIGQRRGIGVATGEPLYVVYLDSRSRRVIVGPKEALETRRVYLRDVNWLGDEELEAAAGQ 314

Query: 286 --EVAVRIRYRQQPLSARVTLRDGRLYARFREPQPPAARGQVLAVYD---MEHHVLGGGV 340
             E   ++R  ++P  A +      LY    E +   A GQ  A+Y     +  V GGG 
Sbjct: 315 GFECFAKVRSTRRPAPAVLKSDAEGLYVELVEGEAGVAPGQACALYSGTGEDARVYGGGF 374

Query: 341 I 341
           I
Sbjct: 375 I 375