Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 374 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Dechlorosoma suillum PS

 Score =  165 bits (418), Expect = 2e-45
 Identities = 125/370 (33%), Positives = 181/370 (48%), Gaps = 35/370 (9%)

Query: 2   TIAVAMSGGTDSLFALVLLKEQGQQVCGLHARFIPPTGHDP-------VPDIRAMCDRLG 54
           T+ V +SGG DS  A +LLK QG +V GL  +      ++        + D+ ++ D +G
Sbjct: 9   TVVVGLSGGVDSSVAALLLKRQGWKVVGLFMKNWEDDDNEEYCSSRQDLIDVMSVADTIG 68

Query: 55  VDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLATG 114
           +D+ VV+  + ++E V   F+++Y  GRTPNP   CN+ +KF    D A  +GA  +ATG
Sbjct: 69  IDVEVVNFAKEYKERVFAEFLKEYQAGRTPNPDILCNSEIKFKAFLDHAMQLGADKIATG 128

Query: 115 HYA--RLLRHPRWGTV---LQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGE 169
           HYA  R + HP    V   L +  D  KDQSYFL  +  A+L K +FPL +W K  VR  
Sbjct: 129 HYAGVREVPHPAGVGVEYQLLKAEDGTKDQSYFLHRLNQAQLSKTLFPLADWYKRDVRKL 188

Query: 170 LARRSIVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPI-VTTRGRKIGSHAGLWQY 228
                +      +S  ICF+ +  ++ FL   R   P  G I     G+ +G H G+  +
Sbjct: 189 ALEEGLHVAAKKDSTGICFIGERPFKDFL--MRYLPPQKGEIRDLDSGKVLGEHDGMTYH 246

Query: 229 TEGQRKGLGIAW----------HEPLYVVGKDMENNML-LVGGRE--ALASPGCVAEEVN 275
           T GQRKGL I            H+  +V  KD+  N+L +V G +  AL S    A +++
Sbjct: 247 TIGQRKGLHIGGLAGGQKTNGEHDAWFVAKKDVAANVLYVVQGHDHPALLSGRLEAHDLS 306

Query: 276 LL---VPYEDWPAEVAVRIRYRQQPLSARVTLRDGR-LYARFREPQPPAARGQVLAVYDM 331
            +    P   W      + RYRQ+     V   DG      F EPQ     GQ + +Y+ 
Sbjct: 307 WVSGRAPRPHW--VYCAKTRYRQEDAPCEVERVDGESCLIDFAEPQWAVTPGQSVVLYE- 363

Query: 332 EHHVLGGGVI 341
               LGGGVI
Sbjct: 364 SRVCLGGGVI 373