Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  530 bits (1366), Expect = e-155
 Identities = 262/351 (74%), Positives = 287/351 (81%), Gaps = 6/351 (1%)

Query: 1   MTIAVAMSGGTDSLFALVLLKEQGQQVCGLHARFIPPTGH------DPVPDIRAMCDRLG 54
           M IAVA+SGGTDSLFAL+LL EQGQ V GLHARF+PP         DP   I AMC RLG
Sbjct: 1   MKIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQPSGNPDPAEAIGAMCARLG 60

Query: 55  VDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLATG 114
           VD H VDL +AFEE VV PF+E+Y+VGRTPNPCARCNATMKFGLL DAA  +GA  LATG
Sbjct: 61  VDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLDAARALGAARLATG 120

Query: 115 HYARLLRHPRWGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGELARRS 174
           HY R LRHP+WG  LQRG DPAKDQSYFLSLV  ARLE+AVFPLGNWRKE V+ EL +R+
Sbjct: 121 HYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVKRN 180

Query: 175 IVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGLWQYTEGQRK 234
           IVPPLPSESQEICFVP DDYRAFL+DR+VRLPGPGPIVT RGRKIGSH GLWQYTEGQR+
Sbjct: 181 IVPPLPSESQEICFVPGDDYRAFLRDRQVRLPGPGPIVTMRGRKIGSHKGLWQYTEGQRR 240

Query: 235 GLGIAWHEPLYVVGKDMENNMLLVGGREALASPGCVAEEVNLLVPYEDWPAEVAVRIRYR 294
           GLGIAW EPLYVV KDMENN+LLVGGRE LA+ GC+ E+VNLLV   DWPAE++VR RYR
Sbjct: 241 GLGIAWEEPLYVVSKDMENNVLLVGGREHLAARGCLTEDVNLLVDPADWPAEISVRTRYR 300

Query: 295 QQPLSARVTLRDGRLYARFREPQPPAARGQVLAVYDMEHHVLGGGVILGPL 345
           Q P  ARVT+ D  +  RFREPQ P ARGQV AVYD E HVL GGVILGP+
Sbjct: 301 QAPQPARVTVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGVILGPV 351