Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 368 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  184 bits (466), Expect = 4e-51
 Identities = 131/370 (35%), Positives = 183/370 (49%), Gaps = 34/370 (9%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGLHARFIPP--------TGHDPVPDIRAMCDRLG 54
           + + MSGG DS  +  LLKEQG +V GL  +            T  D + D  ++ D +G
Sbjct: 6   VVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTREDWI-DAVSVADVVG 64

Query: 55  VDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLATG 114
           VD+  V+    +++ V   F+ +Y  GRTPNP   CNA +KF    D A  +GA  +ATG
Sbjct: 65  VDIEAVNFASEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMKLGADLIATG 124

Query: 115 HYARLLRHPRWGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGELARRS 174
           HYAR+ + P+    L + +D +KDQSYFL  +   +L + VFPLG   K  VR    +  
Sbjct: 125 HYARVRQGPQGDFQLLKALDASKDQSYFLHRLNQEQLSRTVFPLGEIHKTEVRRIAEQLQ 184

Query: 175 IVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGLWQYTEGQRK 234
           +      +S  ICF+ +  +R FL   R     PGPI T  G+ +G H GL  YT GQRK
Sbjct: 185 LPNAKKKDSTGICFIGERPFREFL--NRYLSYKPGPIKTADGQTVGEHVGLSFYTLGQRK 242

Query: 235 GLGI--------------AWHEPLYVVGKDMENNML-LVGGREA--LASPGCVAEEVNLL 277
           G+GI              AW    YV  KD+ENN L +V G +   L SP   A +V+ +
Sbjct: 243 GIGIGGLKAHQNADGHGDAW----YVARKDVENNTLYIVQGHDHPWLLSPTLSAGQVSWV 298

Query: 278 VPYEDWPAEVAVRIRYRQQPLSARVTLRDGRLYARFREPQPPAARGQVLAVYDMEHHVLG 337
             +    A ++ + RYRQ  +    +         F  PQ     GQ   +YD +   LG
Sbjct: 299 AGHAPQMAALSAKTRYRQADVPCGFSDAGASFSLAFDTPQWAVTPGQSAVLYDGD-VCLG 357

Query: 338 GGVI-LGPLP 346
           GG+I  G LP
Sbjct: 358 GGIIENGALP 367