Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 370 a.a., tRNA 2-thiouridine(34) synthase MnmA from Ralstonia sp. UNC404CL21Col

 Score =  172 bits (436), Expect = 1e-47
 Identities = 132/364 (36%), Positives = 177/364 (48%), Gaps = 27/364 (7%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGLHARFIPP--------TGHDPVPDIRAMCDRLG 54
           I V MSGG DS     LLK+QG  V GL  +            T  D + D+ ++ D +G
Sbjct: 6   IVVGMSGGVDSSVTAWLLKQQGYDVVGLFMKNWEDDDDSEYCSTRQDWI-DVVSVADLIG 64

Query: 55  VDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLATG 114
           VD+  V+    +++ V   F+ +Y  GRTPNP   CNA +KF    D A  +GA  +ATG
Sbjct: 65  VDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGADTIATG 124

Query: 115 HYARLLRHPRWGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGELARRS 174
           HYAR +R       L +  D  KDQSYFL  +  A+L + +FPLG   K  VR   A   
Sbjct: 125 HYAR-VREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTKVREIAAEIG 183

Query: 175 IVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGLWQYTEGQRK 234
           +      +S  ICF+ +  +R FL   R     PGPI T  G+ IG H GL  YT GQRK
Sbjct: 184 LPNAKKKDSTGICFIGERPFRDFL--NRYLPTKPGPIKTPDGKTIGEHIGLAFYTRGQRK 241

Query: 235 GLGIAWH-----EPLYVVGKDM-ENNMLLVGGREA--LASPGCVAEEVNLLVPYEDWPAE 286
           G+GI        +  YV  KDM  N + +V G +   L +    A++++ +  +   PAE
Sbjct: 242 GIGIGGSRDGNGDAWYVARKDMAANTLYVVQGHDHPWLLAHTVHADDLSWVAGHA--PAE 299

Query: 287 ---VAVRIRYRQQPLSARVT-LRDGRLYARFREPQPPAARGQVLAVYDMEHHVLGGGVIL 342
              +  + RYRQ      V    DG L   F E Q     GQ   +YD E   LGGG+I 
Sbjct: 300 GTHLGAKTRYRQADAPCTVARAADGALTLAFPEAQWAVTPGQSAVLYDGE-ICLGGGIIS 358

Query: 343 GPLP 346
              P
Sbjct: 359 AAEP 362