Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 372 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (474), Expect = 5e-52
 Identities = 131/360 (36%), Positives = 183/360 (50%), Gaps = 27/360 (7%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGLHARFIPPTGHDP-------VPDIRAMCDRLGV 55
           + V MSGG DS  +  LL +QG QV GL  +      +D        + D +A+CD+LG+
Sbjct: 13  VIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLGI 72

Query: 56  DLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHV-GAVHLATG 114
            LH V+    + ++V   F+ +Y  GRTPNP   CN  +KF    D A  +  A ++A G
Sbjct: 73  KLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFADDILDADYIAMG 132

Query: 115 HYARLLRHPRWGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGELARRS 174
           HY R   +    T + RGVD  KDQSYFL  + H ++ +++FP+G   K  VR    +  
Sbjct: 133 HYVRRRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKKMG 192

Query: 175 IVPPLPSESQEICFVPDDDYRAFLKDRRVRLPG-PGPIVTTRGRKIGSHAGLWQYTEGQR 233
           ++     +S  ICF+ +  +  FL +    LP  PG I T  G  IG H GL   T GQR
Sbjct: 193 LITHDKKDSTGICFIGERKFTEFLGN---YLPAQPGNIETAEGEIIGKHQGLMYQTLGQR 249

Query: 234 KGLGIAW-----HEPLYVVGKDMENNMLLV---GGREALASPGCVAEEVNLLVPYEDWPA 285
           KGLGI        +P YVV KD++ N+L+V   G    L S G +  +++ +      PA
Sbjct: 250 KGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWV--DRKGPA 307

Query: 286 E---VAVRIRYRQQPLSARVT-LRDGRLYARFREPQPPAARGQVLAVYDMEHHVLGGGVI 341
           E   + V+ RYRQQ +   +T L D  L   F EP      GQ    YD E   LGGG+I
Sbjct: 308 EGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGE-VCLGGGII 366