Pairwise Alignments

Query, 421 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 943 a.a., PAS domain S-box from Sphingomonas koreensis DSMZ 15582

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 28/264 (10%)

Query: 154 LLRGLSHDFGNALASIMGFAEIARTRPVDDPLLARSLDNVLKGCAQALSLMDRARAMAGR 213
           L  G++HDF N L +++   E+ R R  +DPL  R L+N ++G  +  +L  R  A A R
Sbjct: 574 LTGGVAHDFNNLLMAVLSSLELLRRRLPEDPLSQRLLNNAVEGAQRGATLTQRMLAFARR 633

Query: 214 QSPSFQVCDLEALVETWCGELMSGNDAVGQALVWHARTNGGCGLSSGTVQEGSDATVAPS 273
           +       DL  L       L   ND V +++                   G +  ++ S
Sbjct: 634 EDLKVDRVDLSQL-------LTGMNDLVQRSI-------------------GPEWPISTS 667

Query: 274 MRPTPMVVRCDPSLLQRAFVAIVDNARDAAET-GETAGGVHVRLFTDGATARRHAG-WCG 331
                  VR D + L+ A + ++ NARDA    G         +   G  A   AG +  
Sbjct: 668 FPLKLPAVRADANQLEMALLNLIVNARDAMPAGGPILISASCEMTKQGMAASLPAGSYVK 727

Query: 332 IAVSDGGAGLSPEDFFRFGDPYRHAGGAREGRGNGVALARGIMRALGGALEVATFPGRGT 391
           + V D G G+  E   R  +P+    G  +G G G+ +  G+ + +GG  E+ +  G GT
Sbjct: 728 LVVKDKGMGMDAETLRRATEPFFTTKGVGKGTGLGLPMVHGMAQQIGGTFELLSEIGEGT 787

Query: 392 VVYLLLPPAEGGDWLLPGTGPVGE 415
              L LP AE     +  + P  E
Sbjct: 788 RAVLWLPVAEEAPAAVADSAPAKE 811