Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 618 a.a., Excinuclease ABC subunit C from Xanthomonas campestris pv. campestris strain 8004

 Score =  285 bits (730), Expect = 4e-81
 Identities = 220/665 (33%), Positives = 311/665 (46%), Gaps = 92/665 (13%)

Query: 27  PGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTV---AMLRHAVTIDTLSTTT 83
           PGVY        ++YVGKA  LR+RV SYF      TPK     +ML     +D   T +
Sbjct: 22  PGVYRMYAADDSLLYVGKAGALRKRVGSYFNG----TPKNARLTSMLSQVARMDVTVTRS 77

Query: 84  EKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRDDGRYFGPF 143
           E EALLLE  LIK   PRYN+ LRDDK Y    +  +  +PR+ + R  R  +GRYFGP+
Sbjct: 78  EAEALLLENQLIKSLSPRYNVSLRDDKSYPYVLL-TREDWPRIALHRGPRAVNGRYFGPY 136

Query: 144 TSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPCVNEVPSETYAALLE 203
              +A RET   +H+ F LR C D  F NR R CL + +G+C  PCV+ V ++ Y   + 
Sbjct: 137 AGVTAVRETLNLMHKLFKLRSCEDSVFRNRSRPCLQYQIGRCSAPCVDLVAAQDYQEAVR 196

Query: 204 QVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTVERQAAVLPGGGDL 263
           + ++ L G+S +L + +   M+ AS+ L+FERAA LRD + +L R+++ +  V     DL
Sbjct: 197 RATMFLEGKSDQLGEEIMHSMQQASEALEFERAARLRDLLSSL-RSMQNRQYVDGRAADL 255

Query: 264 DVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGLGFAEAPELLWSFLGQFYGPQATIPP 323
           DV+      +   + +L  R G  L  RSFF    G   A E+L +F+ Q+Y   A  PP
Sbjct: 256 DVLACATQSSQACVLLLSFRDGRNLGTRSFFPKTNGEDSAEEILAAFVSQYYAEHA--PP 313

Query: 324 RIVVPWLPDEDGETGDALDGSSDAVVPVAAATTIDASLADVRTGTEVTSLINASHAAPNV 383
           R ++                             +D  + D                    
Sbjct: 314 REIL-----------------------------LDREIPD-------------------- 324

Query: 384 GESTQGDTLAGATGKGATH-LMLETALAALRGGIVRIALPRNPAENRLVDMAMSNAREEA 442
                 + +  A    A H + L+  +   R G + +A  RN A+  LV    S + + A
Sbjct: 325 -----AELIEAALSAAAEHKVALKWNVRGERAGYLLLA-SRN-AQLTLVTELTSQSAQHA 377

Query: 443 RRKADTPLQDLLARALHLAGPPHRIEAVDVSHTGGRNTRVGMVVFEDGKPFPEAYRTYAF 502
           R +A       L   L LA    R+E  D+SHT G  T    VVF+   P    YR +  
Sbjct: 378 RSEA-------LREMLGLAEQVKRVECFDISHTMGEATVASCVVFDASGPVRGQYRRFNI 430

Query: 503 ED-GDGDDYGTLAAWAGRR----VESGPPWPDLLLVDGGRGQLAAVVRAFEECGMGAAFA 557
                GDDY  +     RR    VE     PD+LL+DGG GQLA    A  + G+     
Sbjct: 431 SGITPGDDYAAMRQAIERRFRRAVEENGVLPDVLLIDGGAGQLAQAQAALADLGIE---N 487

Query: 558 VASIAKARTEEGRADRRAGNVSD-RIFLPGRANPLPLRAGAPELLFLQHVRDTVHDYSIG 616
           V  +  A+ EE RA   A  ++D R   PG        A +P L F+Q VRD  H ++I 
Sbjct: 488 VLLVGVAKGEERRAGHEALILADGRELRPG--------AASPALQFIQQVRDEAHRFAIT 539

Query: 617 KHRRARAGAALTGELQRVEGIGPATARALWERFDSLQAMADAGVEGLAAVPGVGRARAAA 676
            HR  R  A +T +L+ + GIGP    +L + F  L  +  AG   +A V GV  A AA 
Sbjct: 540 GHRGRRQKARMTSKLEDIPGIGPRRRASLLKHFGGLVGLKAAGEAEIARVEGVNAALAAR 599

Query: 677 LHAHL 681
           ++A+L
Sbjct: 600 IYANL 604