Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 704 a.a., excinuclease ABC subunit UvrC from Rhodopseudomonas palustris CGA009

 Score =  264 bits (675), Expect = 1e-74
 Identities = 213/677 (31%), Positives = 300/677 (44%), Gaps = 101/677 (14%)

Query: 24  PLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVTIDTLSTTT 83
           P +PGVY   +    ++YVGKA+ +++R+ASY R    +  +   M+   V ++ +STTT
Sbjct: 91  PTSPGVYRMLNAERDVLYVGKAKNVKKRLASYARPTGQVL-RIARMIALTVEVEVISTTT 149

Query: 84  EKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRDDGRYFGPF 143
           E EALLLEA+LIK+ RPR+N+ LRDDK +    I + H  P++   R A+   GRYFGPF
Sbjct: 150 ETEALLLEANLIKQLRPRFNVQLRDDKSFPYILITSDHWAPQILKHRGAQSRPGRYFGPF 209

Query: 144 TSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPCVNEVPSETYAALLE 203
            SA A   T   + RAF +R C+D  F +R R CL + + +C GPC  EV    Y+ L+ 
Sbjct: 210 ASAGAVNRTITALQRAFLVRSCTDSFFESRTRPCLLYQIRRCAGPCTGEVDFPGYSELVR 269

Query: 204 QVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTVERQAAVLPGGGDL 263
           + +  LSGRS  + + L  EME AS  L+FE AA+ RDR+ AL     +Q        + 
Sbjct: 270 EATDFLSGRSRAVKELLAAEMEKASGELEFETAALYRDRLAALSAIQSQQGINPRTVEEA 329

Query: 264 DVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGLGFAEAPELLWSFLGQFYGPQATIPP 323
           DV  + +      + V F R G     R++F          E+L +F+ QFY  +   PP
Sbjct: 330 DVFAIHQDGGYSCVEVFFFRTGQNWGNRAYFPRAEKSFTPAEVLGAFVAQFYDDKP--PP 387

Query: 324 RIVVPWLPDEDGE-TGDALDGSSDAVVPVAAATTIDASLADVRTGTEVTSLINASHAAPN 382
           ++++     E+ E   DAL         V A   ++ ++       E+      +HA  N
Sbjct: 388 KLILLSHEIEEAELLADAL--------CVKAGHKVEITVPKRGEKKEL-----VAHAQTN 434

Query: 383 VGESTQGDTLAGATGKGATHLMLETALAALRGGIVRIALPRNPAENRLVDMAMSNAREEA 442
             E+  G  LA      AT   L   LA   G      LP+ P                 
Sbjct: 435 AREAL-GRKLADT----ATQARLLENLATTLG------LPKTP----------------- 466

Query: 443 RRKADTPLQDLLARALHLAGPPHRIEAVDVSHTGGRNTRVGMVVFEDGKPFPEAYRTYAF 502
                                  RIE  D SH  G N    M+V          YR +  
Sbjct: 467 ----------------------QRIEVYDNSHIQGTNAVGAMIVAGPDGFIKNQYRKFNI 504

Query: 503 ED---GDGDDY----------------------GTLAAWAGRRVESGPPWPDLLLVDGGR 537
                  GDDY                      G  AA A  + +  P WPDL+++DGGR
Sbjct: 505 RSEGLTPGDDYAMMREVLQRRFKRLVTSQAEGDGEAAAKAKPKDDDVPQWPDLVIIDGGR 564

Query: 538 GQLAAVVRAFEECGMGAAFAVASIAKARTEEGRADRRAGNVSDRIFLPGRANPLPLRAGA 597
           GQL A   A    G+     +  +AK        DR AG   + +FLP R + + L    
Sbjct: 565 GQLNAAREALSGIGLTDQVTLLGVAKG------PDRDAGR--ETLFLPDR-DAIKLEPRD 615

Query: 598 PELLFLQHVRDTVHDYSIGKHRRARAGAALTGELQRVEGIGPATARALWERFDSLQAMAD 657
           P L F+Q +RD  H + IG HR  R        LQ + GIGP   RAL   F +L+ +  
Sbjct: 616 PVLYFIQRLRDEAHRFVIGSHRTLRKKDIREAGLQEIPGIGPTRKRALLLHFGTLKEIER 675

Query: 658 AGVEGLAAVPGVGRARA 674
           A +  L  VPG+    A
Sbjct: 676 ASIADLGKVPGISAESA 692