Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 686 a.a., excinuclease ABC subunit C from Cupriavidus basilensis FW507-4G11

 Score =  285 bits (729), Expect = 5e-81
 Identities = 230/712 (32%), Positives = 330/712 (46%), Gaps = 85/712 (11%)

Query: 11  SPAPME-RPDLSTIPLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTVAM 69
           S AP + +  ++ +P  PGVY Y D  G ++YVGKAR L++RV+SYF   + L+P+   M
Sbjct: 18  SDAPFDAKAVIAQLPGLPGVYRYFDAQGNVLYVGKARDLKKRVSSYFNK-TLLSPRIAMM 76

Query: 70  LRHAVTIDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIV 129
           +   V IDT    TE EALLLE +LIK   PRYNI+ RDDK Y   ++   H +PR+   
Sbjct: 77  VAKIVRIDTTVVRTEAEALLLENNLIKALAPRYNILFRDDKSYPFVKL-TSHRFPRMAYY 135

Query: 130 RKARRDDGRYFGPFTSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPC 189
           R A     +YFGPF SA A RE+ + + R F LR C D  F NR R CL H + +C GPC
Sbjct: 136 RGATDRKHQYFGPFPSAGAVRESMQILQRVFQLRTCEDTVFTNRTRPCLLHQIHRCTGPC 195

Query: 190 VNEVPSETYAALLEQVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERT 249
           V  +    Y   +   +  L GR  E+++ L+ +ME  +  L+FE+AA +RD+I AL   
Sbjct: 196 VGAISEADYMRDVSNAARFLQGRQNEVLEGLQAKMEEHAGRLEFEQAAAVRDQIGALSTV 255

Query: 250 VERQAAVLPG-GGDLDVVGVVEVENGLA-LGVLFVRQGVLLDGRSFFWPGLGFAEAPELL 307
           ++RQA    G   D+DV+ V  VE G A + +  VR G  L  +++F       E   ++
Sbjct: 256 LKRQAVEEVGQSSDIDVLAVA-VEGGRACVNLAMVRGGRHLGDKAYF---PAHVEEGAMI 311

Query: 308 WSFLGQFYGPQATIPPRIVVPWLPDEDGETGDALDGSSDAVVPVAAATTIDASLADVRTG 367
                +  G  A   P        +  GE   A  G +   V   AA  + A LA     
Sbjct: 312 VGHRDEDAGASAVTEP-------GEAGGEGAAAPGGPAGIPVERIAAEVLSAFLAQHYLD 364

Query: 368 TEVTSLINASHAAPNVGESTQGDTLAGATGKGATHLMLETALAALRGGIVRIALPRNPAE 427
             V  ++  SH  P               GK      L  AL+   G   ++ L R P  
Sbjct: 365 QAVPPILVVSHLPP---------------GKA-----LLEALSMQAGR--KVTLVRQPQG 402

Query: 428 NRLVDMAMSNAREE---ARRKADTPLQDLLARAL-HLAGPPH------RIEAVDVSHTGG 477
            R   + M+    E   +RR A+   Q    RAL    G         R+E  D+SHT G
Sbjct: 403 QRRSWLEMAQKGAELALSRRLAEQGSQQARTRALAETIGIDMEDLALLRVECFDISHTAG 462

Query: 478 RNTRVGMVVFEDGKPFPEAYRTYAFED-GDGDDYGTLAAWAGRRV-----------ESGP 525
             T+   VVF   +     YR Y  +D   GDDY  +     RR            E+ P
Sbjct: 463 EATQASCVVFHHHEMQNAEYRRYNIQDITPGDDYAAMRQVLTRRYQKLVEMLEQAQEAAP 522

Query: 526 PW----------------PDLLLVDGGRGQLAAVVRAFEECGMGAAFAVASIAKARTEEG 569
                             P+++L+DGG+GQ+    + FEE G+     V  +AK    EG
Sbjct: 523 GGDEQGREAGASSALALVPNVVLIDGGKGQVEVARQVFEELGLDIGLLV-GVAKG---EG 578

Query: 570 RADRRAGNVSDRIFLPGRANPLPLRAGAPELLFLQHVRDTVHDYSIGKHRRARAGAALTG 629
              R+ G +   IF  GR + L L  G+  L+ +  +RD  H ++I   R  RA    T 
Sbjct: 579 ---RKVG-LETLIFADGRPS-LELGQGSAALMLVAQIRDEAHRFAITGMRARRAKVRNTS 633

Query: 630 ELQRVEGIGPATARALWERFDSLQAMADAGVEGLAAVPGVGRARAAALHAHL 681
            L+ +EG+G    + L  RF  L+ +  A ++ LA+V G+  A A  ++  L
Sbjct: 634 RLEEIEGVGARRRQKLLTRFGGLRGVVAASIDELASVDGISHALAEEIYRQL 685