Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 657 a.a., excinuclease ABC subunit UvrC from Ralstonia sp. UNC404CL21Col

 Score =  288 bits (736), Expect = 8e-82
 Identities = 219/694 (31%), Positives = 321/694 (46%), Gaps = 65/694 (9%)

Query: 2   PTAVEPLTPSPAPM--ERPDLSTIPLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDV 59
           P +VEP  P+  P    +  ++ +P  PGVY Y D  G ++YVGKAR L++RV+SYF   
Sbjct: 14  PDSVEPSAPANVPEFDAKAHIARLPNLPGVYRYFDAQGNVLYVGKARDLKKRVSSYFNK- 72

Query: 60  SALTPKTVAMLRHAVTIDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGA 119
           + L+P+   M+     IDT    +E EALLLE +LIK   PRYNI+ RDDK Y   ++  
Sbjct: 73  TLLSPRIAMMVAKIARIDTTVVRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKL-T 131

Query: 120 KHPYPRLEIVRKARRDDGRYFGPFTSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLY 179
            H YPR+   R A     +YFGPF SA A RE+ + + + F LR C D  F NR R CL 
Sbjct: 132 HHAYPRMAYYRGATDRKHQYFGPFPSAHAVRESMQILQKVFQLRTCEDTVFNNRTRPCLL 191

Query: 180 HHMGQCLGPCVNEVPSETYAALLEQVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVL 239
           H + +C GPCV  +  E YA  +   +  L GR  E++  L+ +M+  S+ L FE+AA++
Sbjct: 192 HQIHRCSGPCVQAISPEDYARDVANAAGFLQGRQDEVMQTLQDKMQRYSESLAFEQAAIV 251

Query: 240 RDRIRALERTVERQAAVLPG-GGDLDVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGL 298
           RD+I AL   +++Q+    G   D+D++ V        + +  VR G  L  +++F    
Sbjct: 252 RDQIGALSTVLKQQSVEEVGHASDIDILAVAIKGGHACVNLAMVRGGRHLGDKAYF---- 307

Query: 299 GFAEAPELLWSFLGQFYGPQATIPPRIVVPWLPDEDGETG-DALDGSSDAVVPVAAATTI 357
                           +  +      + V    D   ET  DA   +SD +    A   +
Sbjct: 308 --------------PTHVEEGAAIVGVDVEAGGDPAAETSRDAERMASDILEAFVAQHYL 353

Query: 358 DASLADVRTGTEVTSLINASHAAPNVGESTQGDTLAGATGKGATHLMLETALAALRGGIV 417
           D  +  V     V+  I+A+     + E            +G     LE A       ++
Sbjct: 354 DQFVPPVLV---VSHQIHATELIDALAEQAGRRISVVRQPQGGRRAWLEMAEKGAELSLM 410

Query: 418 RIALPRNPAENRLVDMAMSNAREEARRKA-DTPLQDLLARALHLAGPPHRIEAVDVSHTG 476
           R          RL +     AR  A  +     L+DL A          R+E  D+SHT 
Sbjct: 411 R----------RLSEQGSQQARTRALAETIGIDLEDLAAL---------RVECFDISHTA 451

Query: 477 GRNTRVGMVVFEDGKPFPEAYRTYAFED-GDGDDYGTLAAWAGRRV--------ESGPPW 527
           G  T+   VVF         YR Y  +D   GDDY  +     RR         E  P  
Sbjct: 452 GEATQASCVVFHSHAMQNSEYRRYNIQDITPGDDYAAMRQVLTRRYQKIVEQAGEDTPNM 511

Query: 528 PDLLLVDGGRGQLAAVVRAFEECGMGAAFAVASIAKARTEEGRADRRAGNVSDRIFLPGR 587
           P ++L+DGG+GQ+    + FEE G+     V  +AK    EG   R+ G +   IF  GR
Sbjct: 512 PSIVLIDGGKGQVEVARQVFEELGLDIGLLV-GVAKG---EG---RKVG-LETLIFADGR 563

Query: 588 ANPLPLRAGAPELLFLQHVRDTVHDYSIGKHRRARAGAALTGELQRVEGIGPATARALWE 647
            + L L  G+  L+ +  +RD  H ++I   R  RA A  T  L+ +EGIG    + L  
Sbjct: 564 PS-LELGQGSAALMLVAQIRDEAHRFAITGMRAKRAKARNTSRLEEIEGIGAKRRQRLLA 622

Query: 648 RFDSLQAMADAGVEGLAAVPGVGRARAAALHAHL 681
           RF  L+ +  A V+ LA V G+ +  A  ++  L
Sbjct: 623 RFGGLRGVMAASVDELATVEGISQTLAEEIYRQL 656