Pairwise Alignments

Query, 356 a.a., molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 337 a.a., tyrosine recombinase XerD from Phaeobacter inhibens DSM 17395

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 65/209 (31%), Positives = 85/209 (40%), Gaps = 20/209 (9%)

Query: 17  NPAGMLTIPDEVRCLDTNDLEKLESAFRAWVAKGRGAGVTLARRRILALFLLLRHTGARL 76
           NPA  +  P   + L    LE +E       A+  G  ++  R R   +  LL  TG R+
Sbjct: 106 NPAIQIKGPGRQKALPKT-LEVIEVDRLLDAARQSGRNLS-DRLRNTCMMELLYATGMRV 163

Query: 77  GEASGLEGRS--------LVLEKG----LVRLGTPPRDVLVAETVLAEIVGLVTTGGGRE 124
            E  GL   +        LVL KG    +V L  P RD L A     +         G  
Sbjct: 164 SELVGLPVAAARGDPRMLLVLGKGGKERMVPLSPPARDALAAWLTTRDAAEEAAVAKGA- 222

Query: 125 SPVLPEYPFAVDPGHV-RRKFYAC----AEAAGLGREMGSPSVLRRSRAVELLRGGVPLP 179
           +P    +P     GH+ R +FY      A A GL  E  SP  LR + A  LL  G  L 
Sbjct: 223 APSRFLFPSRGKSGHLTRHRFYLLIKEFAVAGGLPPEAVSPHTLRHAFATHLLTNGADLR 282

Query: 180 AVQRLLGHGNAELTAAYVAVPDDAMRRMV 208
           A+Q LLGH +   T  Y  V D  +  +V
Sbjct: 283 AIQALLGHADIATTEIYTHVLDARLSELV 311