Pairwise Alignments

Query, 176 a.a., transporter, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 188 a.a., putative lipoprotein (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.7 bits (143), Expect = 3e-14
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 29/188 (15%)

Query: 4   LFNLVLAAALLLSLAGCA----VYSV-----PHDERSVGTIVDDS----VIVSDIKADLV 50
           +  L+L A   ++L GCA    V +V      +DERS+ T +DD+    VI S +  D  
Sbjct: 1   MIRLLLTALACITLTGCAGAVMVGAVGGAVMANDERSIATQLDDTNADFVISSALMKD-E 59

Query: 51  GMDGSDGLATKVYSFGGRVYLVGE-PSVSFRDKAVRAARQVK-------GVRSVTPHWFA 102
            +     +   V +  G V ++G+ P+ + RDKAV+  + +K        +R   P  F 
Sbjct: 60  ELKAKTNITAVVMN--GNVLMIGQAPNSTLRDKAVKVVQDLKLGGKIHNQIRIGNPTSFT 117

Query: 103 PGTGRTMDDTVVATRVRTNLIAEKALSSTQIELEVYGGHVVLMGMVRAAADVDRAVRVTR 162
             +    +DT + T+V+  ++ EK L  T++++    G V L+G++   +  + AV V R
Sbjct: 118 TRS----NDTWITTKVKGRMLNEKTLDITRVKVVTENGEVFLLGLI-PRSQAELAVEVAR 172

Query: 163 ATQGVRGV 170
            T GVR V
Sbjct: 173 NTAGVRKV 180