Pairwise Alignments

Query, 237 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 305 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  157 bits (397), Expect = 2e-43
 Identities = 92/256 (35%), Positives = 138/256 (53%), Gaps = 34/256 (13%)

Query: 4   VTGVFVSVRHERTGTGTTARESVQRITWFGT-------------------------LRDD 38
           V GV+VSVR ERTG G+T+R+  Q+I W                            L + 
Sbjct: 5   VLGVYVSVRTERTGMGSTSRDVSQKIYWLAACQAAGPDPAGQTERLDGSGRAGKTELAEG 64

Query: 39  GVALVMPLSDRMLPTGIIREVPEERFLEEFMPDQATYEEHFRETAESLRGRLQ------- 91
           G  ++ PL++  LP+G+++E+PE  F+E F+PD   YE+  R  AE+L   +        
Sbjct: 65  GRYILQPLTEAHLPSGLVKELPEADFIEHFLPDADCYEKFIRPAAEALAAYIDDLPADAP 124

Query: 92  --LASTLPTDLYPEERILLDALSALLHGRSAAKPVDADIPAVLELLAHGQEGRSAGAFQT 149
             +    P  L  +++ +L+ L A+L GR    P   D+P +  +L      R    FQ 
Sbjct: 125 FSVEQFSPLALPFDQQRVLEGLLAVLRGRPGLVPRAHDVPDLRAMLEGMCRLRMVPDFQN 184

Query: 150 RLSGAAVDYRRQGDYPRALLFYDRALTMQGQEDRLLFNVARVHYEMGELAEAETCLKRAL 209
           R++G A+  R++GDY  A  +Y+RAL + GQEDR+LFN+ARV+YE G   +A  CL+RAL
Sbjct: 185 RVAGVAIGLRKRGDYAAAEYYYERALAVSGQEDRILFNLARVYYETGRPQQAADCLRRAL 244

Query: 210 ESNPALEEAGRFLAFL 225
            +NP L  A +FL F+
Sbjct: 245 AANPGLAVAEQFLRFV 260