Pairwise Alignments

Query, 237 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 254 a.a., TPR repeat-containing protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 13/233 (5%)

Query: 3   LVTGVFVSVRHERTGTGTTARESVQRITWFGTLRDDGVALVMPLSDRMLPTGIIREVPEE 62
           ++ GV+   +    G G TA +  Q   W+    D  +  V PL+   +P+GI + + E 
Sbjct: 16  IILGVYSLQQDAMVGIGGTASQQRQVTYWYARKLDAAICEVQPLNVHHVPSGIRKPMEEL 75

Query: 63  RFLEEFMPDQATYEEHFRETAESLRGRLQLASTLPTDLYPEE-------RILLDALSALL 115
            FL  +MP+   Y+ H      SL  +L        +L  +E        +++D L+   
Sbjct: 76  EFLRNYMPEPMYYKNHTVPALTSLHRKLIEGEACLAELRLDEAEKAFIKALMIDDLNVPA 135

Query: 116 H---GRSAAKPVD-ADIPAVLELLAHGQEGRSAGAFQTRLSGAAVDYRRQGDYPRALLFY 171
           +   G   A+  D A +  VL +L  G +       + R +   +  R+ G +  +L FY
Sbjct: 136 NFGLGEVYAEKKDAARLRKVLHVLM-GSDEAFLMEHRVRFNKFGISLRKNGHFDDSLRFY 194

Query: 172 DRALTMQGQEDRLLFNVARVHYEMGELAEAETCLKRALESNPALEEAGRFLAF 224
            +AL    +++ L FN+ARVH++ G+       L RAL   P   EA RFL F
Sbjct: 195 HKALECH-EDEHLHFNIARVHFDKGDTGACVQHLTRALAMRPDFTEAQRFLTF 246