Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 82/308 (26%), Positives = 128/308 (41%), Gaps = 77/308 (25%)

Query: 4   LSTLLVHPDPMLRHRLRAMLEPVDFLRVLGEAAGAEEALALLNALPYGAVFLGISLAEGP 63
           LS LL+  +   R  L  +L     + V+G+A+ A E L  +N L    VFL I + +  
Sbjct: 2   LSALLIDDERFAREELAELLAESGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQ-I 60

Query: 64  DGMEVARRLMGNRDHPALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRLRQFR 123
            G+E+   ++     P ++F+   +  A +AFE +A DYL+ P   +R  +T+ RL   R
Sbjct: 61  SGIELLS-MLDPETMPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQRL--LR 117

Query: 124 THFRLAPAPGSRWREQPQAAPEELPPPAMDDLPPPGTEEGPPFETLQLPLAEDEQDTLIS 183
            H +   +P              L  P++D +P  G                        
Sbjct: 118 QHKKSDYSP--------------LTQPSLDQIPCTGL----------------------- 140

Query: 184 ALGEAVDYSQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYS--YVHTADDKYLTS 241
                                     + +L+P  E+ F  AY D S   V TA  K  + 
Sbjct: 141 -------------------------NRIVLLPINEVEF--AYSDISGVNVQTAQQKATSQ 173

Query: 242 YRLKNLEGRLRPHRFFRVHRKYLVNLDMVTELAAVSGGNC-LLRTAGRTRIELPISRRRL 300
             LK LE +       R HR+YLVNL  + E+  +  G   ++  AG    ++P+SRR L
Sbjct: 174 LTLKVLEEKT---ALVRCHRQYLVNLKAIREIKLLENGLAEMITHAGH---KVPVSRRYL 227

Query: 301 GELKQILG 308
            ELK++LG
Sbjct: 228 KELKEMLG 235