Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 358 a.a., two component transcriptional regulator, LytTR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  412 bits (1060), Expect = e-120
 Identities = 220/358 (61%), Positives = 252/358 (70%), Gaps = 49/358 (13%)

Query: 1   MTRLSTLLVHPDPMLRHRLRAMLEPVDFLRVLGEAAGAEEALALLNALPYGAVFLGISLA 60
           MTRL+TLL HPDP +R RLR ML  V FLRVLGEA   EEA ALL+ALPYG  F G+ L 
Sbjct: 1   MTRLNTLLAHPDPEVRQRLRRMLASVPFLRVLGEAVDGEEAWALLDALPYGVFFTGVDLG 60

Query: 61  EGPDGMEVARRLMGNRDHPALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRLR 120
               GME+ARRL+G RD PAL+FIA DE  AFEAF+LDATDYLIFPC  +RF RT+ RL 
Sbjct: 61  GETSGMELARRLLGRRDRPALVFIAGDEKLAFEAFDLDATDYLIFPCPDERFQRTVGRLD 120

Query: 121 QFRTHFRLAPAPGSRWRE--------QPQA-----------APEELPPP----------- 150
           QFR +FRLAP P +RWRE        QPQA           AP + PP            
Sbjct: 121 QFRANFRLAPEPAARWREPHQAQPPQQPQADQPAPQPAGGPAPSQAPPAPAAPSAVRAAI 180

Query: 151 AMDDLPPPGT-------------------EEGPPFETLQLPLAEDEQDTLISALGEAVDY 191
           A  D+ P G+                   E+GPP +TLQL L ++EQD+ +SALG A DY
Sbjct: 181 ASGDIEPLGSWQDGWHEEWRDDGHAPGNPEDGPPVQTLQLALGDEEQDSFLSALGSAWDY 240

Query: 192 SQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVHTADDKYLTSYRLKNLEGRL 251
           + R RPVE+ KLA++ DG T+L+PY EI FVEAYEDYSYVHT+ DKYLTSYRLK LEGRL
Sbjct: 241 TSRFRPVEIGKLAITQDGTTILVPYNEIVFVEAYEDYSYVHTSTDKYLTSYRLKVLEGRL 300

Query: 252 RPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISRRRLGELKQILGL 309
           RPHRFFRVHRKYLVNLDMVTE+A+V GGNC+LRT GRTRIELPISRRRLGELK+ILGL
Sbjct: 301 RPHRFFRVHRKYLVNLDMVTEIASVPGGNCMLRTMGRTRIELPISRRRLGELKEILGL 358