Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 241 a.a., LytTR family DNA-binding domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score = 79.3 bits (194), Expect = 8e-20
 Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 67/306 (21%)

Query: 4   LSTLLVHPDPMLRHRLRAMLEPVDFLRVLGEAAGAEEALALLNALPYGAVFLGISLAEGP 63
           +  L+V  +P+ R  +RA L     ++++GEAA    A+  + +L    VF+ + +  G 
Sbjct: 2   MRVLVVDDEPLARGGVRARLAAHADVQLVGEAADGVAAIKSIESLRPDLVFMDVQMP-GL 60

Query: 64  DGMEVARRLMGNRDHPALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRLRQFR 123
           DG+   R L    + P  I +   +  A  AFE+ A DYL+ P   +RF  +L R R   
Sbjct: 61  DGLAALRHLPP-AERPLSILLTAYDHFAVGAFEIQALDYLLKPIDDERFRESLDRARAAF 119

Query: 124 THFRLAPAPGSRWREQPQAAPEELPPPAMDDLPPPGTEEGPPFETLQLPLAEDEQDTLIS 183
            H           R   +AAP                                     + 
Sbjct: 120 RH-----------RVAGEAAPA------------------------------------VY 132

Query: 184 ALGEAVDYSQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVHTADDKYLTSYR 243
           A    V   QR+  V+ D                EI ++EA +DY+ +H     +L    
Sbjct: 133 AKRFTVRTGQRIAVVDAD----------------EIDWIEACDDYAGLHVGPRVHLLREP 176

Query: 244 LKNLEGRLRPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISRRRLGEL 303
           L  L GRL P +F RVHR  +V LD + EL  +   +CL+R   R    L +SR  + +L
Sbjct: 177 LHQLAGRLDPAQFVRVHRSAIVKLDRIAELEPLVNRDCLVRL--RDGTPLRVSRTYIDQL 234

Query: 304 KQILGL 309
              L +
Sbjct: 235 NAALAV 240