Pairwise Alignments

Query, 665 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1081 a.a., PAS domain S-box protein from Rhodopseudomonas palustris CGA009

 Score =  130 bits (327), Expect = 3e-34
 Identities = 112/432 (25%), Positives = 190/432 (43%), Gaps = 39/432 (9%)

Query: 245 PARDHGATVVGEVAVYSLDVTLPRRAEADLRAAARLHAALAEASSRQFDRQSALLDRVFD 304
           P R+    + G V VY  D+T  ++AE  LR + ++  A+ + +   F +          
Sbjct: 510 PLRNETGEIQGAVMVYH-DITKTKKAEDALRRSEQMSRAIIDTALDAFVQ---------- 558

Query: 305 EVPAGICLMDITGRVLHLNRAMADVVGASETELVGTDCFAMLHPADRA----AARALFMH 360
                   +D  GR+   +     ++G S  E +G D   +  P D+          F+ 
Sbjct: 559 --------LDAQGRITDWSPHAESMLGWSREEAIGQDFGELALPPDQTREIKTGYRRFIE 610

Query: 361 DLENAGSPEGFHELKEYRFLRKDGTARECQVASAMLRDGDGPILGMAVVT----DVTEMR 416
            +E+  S    H + E   +R+DG+    +V+   L     P+ G  VV     D+TE  
Sbjct: 611 AIEHDMSVIQGHRI-EIEAVRRDGSPIALEVSMTAL-----PVEGRFVVNVFMRDLTEKI 664

Query: 417 RIKAEAARMGQLATIGELAAGVAHEINSPANAIINCADLLMEDAFDSAMVRDMARRIRSE 476
             + +  +  ++ +IG+L  G+AH+ N+    I    D++ +   D   +  +A+ I   
Sbjct: 665 AFEEQLRQSQKMESIGQLTGGIAHDFNNMLTVITGTIDIISDGVADQPHLAAIAKLISEA 724

Query: 477 GQRVAAITHNLLAFARERKPPPPPALVDVKVVLRDTLELTAAQMRAEGILLEVSCSSGAL 536
             R A +T  LLAFAR  K P  P   +V  +L     L    +  E I +E   +    
Sbjct: 725 ADRGAELTRLLLAFAR--KQPLRPDETEVNALLSGLQSLLRPTL-GEPIEVETVLAPDTW 781

Query: 537 HVLGRTRELQQVFLNIVSNARHALNAIPGSAARCLSINAEP---RAAGSCVSGPVVSVSF 593
            +     +L+   +N+  NAR A+           ++  +P   +  G    G  V ++ 
Sbjct: 782 SIYVDRGQLESALVNLAVNARDAMPKGGKLTIETSNVVVDPDLGKRFGDLAPGDYVMIAI 841

Query: 594 RDTGGGIDPSIRDRVMEPFFTTKGEGRGTGLGLSISNAIIEDHGGVLCIESDGETGTCVT 653
            D+G GI  +IR +V +PFFTTK  G+GTGLGLS+    I+  GG + ++S+   GT   
Sbjct: 842 TDSGCGIPETIRSKVFDPFFTTKEVGKGTGLGLSMVYGFIKQSGGHITLDSEEGQGTTFR 901

Query: 654 VELPQMVEDGDA 665
           + LP+     DA
Sbjct: 902 LYLPRAQIQVDA 913