Pairwise Alignments

Query, 665 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 872 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  132 bits (331), Expect = 9e-35
 Identities = 115/402 (28%), Positives = 186/402 (46%), Gaps = 53/402 (13%)

Query: 294 RQSALLDRVFDEVPAGICLMDITGRVLHLN---RAMADVV--GASETELVGTDCFAMLHP 348
           RQ+ LL+ +F+ +   + L++  G V+  N   R +AD V  GA     +G+     L  
Sbjct: 460 RQNRLLELIFEGISDPVLLVEEGGTVVLANTSARTLADGVRPGARIGTWLGSISAKAL-- 517

Query: 349 ADRAAARALFMHDLENAGSPEGFHELKEYRFLRKDGTARECQVASAMLRDGDGPILGMAV 408
           AD   A A+   D  N               L   G  R   V+   LRDG      +  
Sbjct: 518 ADGHLAAAIAGRDPSNLE-------------LELPGP-RVMAVSVYPLRDGGDMGRAVVY 563

Query: 409 VTDVTEMRRIKAEAARMGQLATIGELAAGVAHEINSPANAIINCADLLMEDAFDSAMVRD 468
           + D T  RR++A+  +  +LA +G+LAAG+AHEIN+P   +INC   L++        ++
Sbjct: 564 LRDTTLERRVRAQMQQSEKLAALGQLAAGLAHEINNPLG-VINCYAQLLQKTQKDPQAQE 622

Query: 469 MARRIRSEGQRVAAITHNLLAFARERKPPPPPALVDVKVVLRDTLELTAAQMRAEGILLE 528
               I    Q+   +  +LL  AR  +    P+  D+  VLRD  ++   Q+ + G  +E
Sbjct: 623 DLEVIVQHTQKARLVLQDLLGLARANRTLTGPS--DLNAVLRDMAQIFRVQLESAGADIE 680

Query: 529 VSCSSGALHVLGRTRELQQVFLNIVSNARHALNAIPGSAARCLSINAEPRAA-------- 580
           +  + G   V   T  L+Q+  N++ NA   ++A+P    R + +  EP  A        
Sbjct: 681 LDLARGLPRVAADTTSLEQILTNLLVNA---IDAMPQGKGR-IRVRTEPLEATDSGSDGG 736

Query: 581 -------------GSCVSGPVVSVSFRDTGGGIDPSIRDRVMEPFFTTKGEGRGTGLGLS 627
                        GS  +G  V ++  D G GI P    ++ +PFFTTK  G+GTGLGL+
Sbjct: 737 DGGPGEGGTGGNGGSGKAGGYVRLTVSDNGPGIPPENMTQIFDPFFTTKEIGKGTGLGLT 796

Query: 628 ISNAIIEDHGGVLCIESDGETGTCVTV----ELPQMVEDGDA 665
           + + ++ D GG++ +  +G     +T+    ELP   E+ DA
Sbjct: 797 VVHELLRDLGGMVEVTGEGGATFVITLPVAPELPGTSENRDA 838



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 245 PARDHGATVVGEVAVYSLDVTLPRRAEADLRAAARLHAALAEASS 289
           P RD G   +G   VY  D TL RR  A ++ + +L AAL + ++
Sbjct: 550 PLRDGGD--MGRAVVYLRDTTLERRVRAQMQQSEKL-AALGQLAA 591