Pairwise Alignments

Query, 665 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 441 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  126 bits (317), Expect = 2e-33
 Identities = 122/422 (28%), Positives = 192/422 (45%), Gaps = 66/422 (15%)

Query: 286 EASSRQFDRQSALLDRVFDEVPAGICLMDITGRVLHLNRAMADVVGASETELVGTDCFAM 345
           +A+ R  +R    ++ + D +   + ++    R++ +N    D++G  + E  G  C+ +
Sbjct: 32  KAAHRDSERNRLEIEAILDGITDLMMVLSKDLRIIAVNHVFYDILGVRDPE--GRYCYEI 89

Query: 346 L----HPADRAAARALFMHDLENAGSPEGFHELKEYRFLRKDGTARECQVASAMLRDG-- 399
                HP     A   F+ D             +E    R +G   + ++ ++ ++D   
Sbjct: 90  FRQQDHPCPECPAHRSFVTD----------EVCRETSIFRINGRKLQFEMVASPIKDPAT 139

Query: 400 -DGPILGMAVVTDVTEMRRIKAEAARMGQLATIGELAAGVAHEINSPANAIINCADLLME 458
            D  IL      DVT  +  +A+  +  ++AT+G LAAGVAHE+N+P  AI   A+ ++ 
Sbjct: 140 QDRQIL--IFKRDVTLEKEFQAKFHQAEKMATVGMLAAGVAHEVNNPLTAIHGFAEGILR 197

Query: 459 ---------DAFDSAMVRDMARRIRSEGQRVAAITHNLLAFARERKPPPPPALVDVKVVL 509
                    D    A + D A  I  E  R   I H+LL F+R       P  V++ VV+
Sbjct: 198 RVERLRGIVDPEMHADLADYAGTILGECGRCQEIVHSLLTFSRPHSSEFSP--VNLNVVV 255

Query: 510 RDTLELT---AAQMRAEGILLEVSCSSGALHVLGRTRELQQVFLNIVSNARHALNAIPG- 565
            DTL+L      Q +   + ++      A  VL    +L+QV LN++ NA  A +   G 
Sbjct: 256 GDTLKLLHNHLKQPKYRRVRIDARLCPTAPVVLACEAQLKQVMLNLLVNALDAFDGPAGP 315

Query: 566 ------SAARCLSINAEPRAAG-----SCVSG--------PVVSVS-FRD---------- 595
                 S  R  + +A+  AAG     S V+G         V++V+ FRD          
Sbjct: 316 EGKGQASPPRADAGSADGNAAGGDEELSTVNGGRGRNGVEEVITVTPFRDGRHAGFVVHD 375

Query: 596 TGGGIDPSIRDRVMEPFFTTKGEGRGTGLGLSISNAIIEDHGGVLCIESDGETGTCVTVE 655
           TG GI P   D + EPFFTTK  GRG G+GLS    I+ +HGG + +ES    G+  TV 
Sbjct: 376 TGSGIPPEHLDSLFEPFFTTKPVGRGIGIGLSTCYTIVTEHGGDIRVESRVGEGSTFTVT 435

Query: 656 LP 657
           LP
Sbjct: 436 LP 437