Pairwise Alignments

Query, 468 a.a., sodium/alanine symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 459 a.a., amino acid carrier protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  437 bits (1125), Expect = e-127
 Identities = 233/457 (50%), Positives = 313/457 (68%), Gaps = 13/457 (2%)

Query: 5   QLFESVNAFVWGPPLLALLVGTGIYLTIRLGLLQVVRLPLALRYVF-GRDDEHHEE--GD 61
           +L +S+N+ VWG P+L +++G G+YL++ L LL +++L    R ++ GR     +E  GD
Sbjct: 6   ELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVKGD 65

Query: 62  VSSFAALCTALAATIGTGNIVGVATAVAAGGPGALFWMWVAAFFGMATKYAEGLLAVKYR 121
           VS F AL T+L+ATIGTGNI GVATA+  GGPGALFWMW  A  GMATKY+E +LAV+YR
Sbjct: 66  VSPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVRYR 125

Query: 122 VTDANGQMSGGPMYYLERGLGSRM--LARAFALCGILVAFFGIGTFAQVNAIKDAASLSL 179
             D  G   GGPMYY++ GLGS+   L  AFAL G   A FGIG   Q N++  A + + 
Sbjct: 126 EVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFGSF-AGFGIGNTVQANSVASALTSNF 184

Query: 180 GIPPLATAVVLTTTVALVTLGGLRSIARVAEKVVPFMAVFYIIASCAVLVMHLDRIPDAV 239
           G+P   + VV+   V LV +GG++ IA VA K+VP M +FYI A  AVLV++   IP A+
Sbjct: 185 GVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEIPAAL 244

Query: 240 MVILHSAFNPQAALGGAAGMTVLTAMRAGVARGVFSNESGLGSAPIAAAAARTKSCVRQG 299
            +I+ SAF+P AA GG AG  V+ A++ GVARGVFSNE+GLGSAPIA AAA+TKS V QG
Sbjct: 245 SLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKSPVTQG 304

Query: 300 LISMTGTFFDTIVICTMTGLVLVVTGVWNDPQLAGAAMTNAAFAAGLESSLGQYAATLGL 359
           L+ M GTF DTI++C++TGL +VV+G W   +  GAA+T+ AF+  L   +G Y   + L
Sbjct: 305 LVGMLGTFIDTIIVCSITGLAIVVSGAWTSGE-NGAALTSYAFSHAL--PIGDYIVAVAL 361

Query: 360 ILFAFTTILGWNYYGERCTEYLFGVRGILPYRLVFIGLVAAGAFVHLELIWVLADIVNGL 419
            +FAFTTILGW+ Y E+C +YL GV+ ++P+RL++  +V  GA   L+ +W+LAD +N +
Sbjct: 362 AIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVVPLGAMGSLDFVWLLADTLNAM 421

Query: 420 MAIPNLIGLLGLSGVIIAETRAFF----EADAPSVDA 452
           MAIPNLI L  LS V+   TR FF    EA   SV+A
Sbjct: 422 MAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEA 458