Pairwise Alignments

Query, 468 a.a., sodium/alanine symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 488 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (750), Expect = 9e-84
 Identities = 169/431 (39%), Positives = 247/431 (57%), Gaps = 9/431 (2%)

Query: 10  VNAFVWGPPLLALLVGTGIYLTIRLGLLQVVRLPLALRYVFGRDDEHHEEGDVSSFAALC 69
           +NA +WG  L+  LVG G+Y T+RL  +Q+     +L+ +     +  E G +SSF   C
Sbjct: 9   LNALLWGKLLVYGLVGAGLYFTLRLVFIQLTHFKHSLK-IMTMSRQGCESG-LSSFQVFC 66

Query: 70  TALAATIGTGNIVGVATAVAAGGPGALFWMWVAAFFGMATKYAEGLLAVKYRVTDANGQM 129
           T++AA +G GN+ GVA A+ A GPGA+FWMW+ A  GMAT   E  LA  Y+V DANGQ 
Sbjct: 67  TSMAARVGAGNMAGVAVAIGAAGPGAVFWMWLIAMLGMATAMVESTLAQVYKVRDANGQF 126

Query: 130 SGGPMYYLERGLGSRMLARAFALCGILVAFFGIGTFAQVNAIKDAASLSLGIPPLATAVV 189
            GGP YY+E+GLG R +   FA   +++AF  +    Q N I  A     G  P    + 
Sbjct: 127 RGGPSYYMEKGLGQRWMGVLFAFF-LIIAFGLVFNAVQANTITGAMERVFGFDPTYVGIG 185

Query: 190 LTTTVALVTLGGLRSIARVAEKVVPFMAVFYIIASCAVLVMHLDRIPDAVMVILHSAFNP 249
           L      V +GGLR +ARV+E +VP MA+ YI+ +  +++ +L+++P  + +I+ SAF  
Sbjct: 186 LVLASGFVIMGGLRKVARVSEFIVPIMALAYILIAFIIVLFNLEQLPAVISLIVKSAFGW 245

Query: 250 QAALGGAAGMTVLTAMRAGVARGVFSNESGLGSAPIAAAAA--RTKSCVRQGLISMTGTF 307
           Q A  G    TV  AM+AG+ARG+FSNE+G+GSA   AA+A         QG + M G F
Sbjct: 246 QEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVF 305

Query: 308 FDTIVICTMTGLVLVVTGVWNDPQLAGAAMTNAAFAAGLESSLGQYAATLGLILFAFTTI 367
            DTIVICT T  +++++G        G  +T  A +  +    G + A + + LF FT+I
Sbjct: 306 VDTIVICTATAAIILLSGDIGSSD-DGIRLTINAMSNHVGDWGGAFIA-VAIFLFCFTSI 363

Query: 368 LGWNYYGERCTEYLFG--VRGILPYRLVFIGLVAAGAFVHLELIWVLADIVNGLMAIPNL 425
           +    Y E    +L G   + +  +RL  +G+V  G+   + L+W LAD+  GLMA  N+
Sbjct: 364 IANYSYAETNVMFLTGNSTKALPLFRLCVLGMVMFGSVAKISLVWNLADVSMGLMATVNI 423

Query: 426 IGLLGLSGVII 436
           + LL LSG+ I
Sbjct: 424 VALLLLSGLAI 434