Pairwise Alignments

Query, 468 a.a., sodium/alanine symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 494 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  273 bits (699), Expect = 7e-78
 Identities = 163/452 (36%), Positives = 249/452 (55%), Gaps = 37/452 (8%)

Query: 5   QLFESVNAFVWGPPLLALLVGTGIYLTIRLGLLQVVRLPLALRYVFGRDDEHHEEGDVSS 64
           ++  +VN  VW P L+ L +G G++ ++R   LQ+  LP  +R +F   D    +  VSS
Sbjct: 3   EIVNAVNNIVWSPALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMF---DGKSTDAGVSS 59

Query: 65  FAALCTALAATIGTGNIVGVATAVAAGGPGALFWMWVAAFFGMATKYAEGLLAVKYRVTD 124
           F AL   LA  +GTGNI GVATA+  GGPGALFWMW+ AF G ++ + E  L   Y+   
Sbjct: 60  FQALAMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYK-EK 118

Query: 125 ANGQMSGGPMYYLERGLGSRMLARAFAL-----CGILVAFFGIGTFAQVNAIKDAASLSL 179
            NG+  GGP +Y+E+GLG +  A  FA+     CGIL+   G+    Q N+I  +   + 
Sbjct: 119 INGEYRGGPAFYIEKGLGMKWYAWTFAIATIFACGILLP--GV----QANSIGSSLKTAF 172

Query: 180 GIPPLATAVVLTTTVALVTLGGLRSIARVAEKVVPFMAVFYIIASCAVLVMHLDRIPDAV 239
            I P  TA +L   +  +  GG++ IA  A  VVPFMA+ YII +C ++ +++ ++PD +
Sbjct: 173 DIDPNVTAAILAMLLGFIIFGGVKRIAHFASTVVPFMALGYIIVACVIIALNIGQLPDII 232

Query: 240 MVILHSAFNPQAALGGAAGMTVLTAMRAGVARGVFSNESGLGSAPIAAAAARTKSCVRQG 299
           M+IL SAF   A  G   G+ ++     GV RG++SNE+G G+ P A++AA      +QG
Sbjct: 233 MLILKSAFGLDAGFGAILGLAIMW----GVKRGIYSNEAGQGTGPHASSAAAVSHPAKQG 288

Query: 300 LISMTGTFFDTIVICTMTGLVLVVTGVWNDPQLAGAAMTN--AAFAAG-------LESSL 350
           L+     + DT+ +C+ TG +L++TG++N     GAA+    A  AAG       +ES +
Sbjct: 289 LVQAFSVYVDTLFVCSATGFMLLITGLYNVQGPDGAALYTGIAGVAAGPGYVQTAMESMM 348

Query: 351 ---GQYAATLGLILFAFTTILGWNYYGERCTEYLFGVRGILPYRLVFIGLVAAGAFVH-- 405
              G     + L  FAFTTI+ + Y  E    Y+   +   P+  V + +V   + V+  
Sbjct: 349 PGFGNMFVAVALFFFAFTTIVAYYYIAETNIAYI-NRKANRPWLTVVLKVVLMASTVYGT 407

Query: 406 ---LELIWVLADIVNGLMAIPNLIGLLGLSGV 434
               +L W + DI  GLMA  N+I ++ L  +
Sbjct: 408 VKTADLAWGMGDIGVGLMAWLNIIAIILLQRI 439