Pairwise Alignments

Query, 156 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 186 a.a., C4-dicarboxylate ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score = 44.7 bits (104), Expect = 8e-10
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 14/159 (8%)

Query: 11  IERALAALVMAALTLITGANVVMRYCTN------------VSFAMTEEVSVFLLMVLTLV 58
           +E  L A +MAA T I    VV RY +             ++ +  +E+ +F+ + +   
Sbjct: 7   LEEWLIAFLMAAATFIIFVAVVHRYASGLDIPWLQDQLIQINMSWAQELCIFMFVWMAKF 66

Query: 59  GAVSAFAEGRHVRITLFVNSLPDTGRKVCNALAWMCNVAMFGMLTWLAALVAWDDYSFEV 118
           GA      G HV + + +N L    R               G++    A   +D    + 
Sbjct: 67  GAAYGVRTGIHVGVDVLINRLNTPWRNKFVLFGLFAGALFTGIVGTFGAEFVYDIAQHDS 126

Query: 119 TSPALGVPQWWYSGWLPLAAAVIVLRL--VLMLFQRRGK 155
           TS  + VP W     +PL + ++  R   V   F R G+
Sbjct: 127 TSEVMEVPMWIVYLAVPLGSYLMCFRFLQVAWNFHRTGE 165