Pairwise Alignments

Query, 295 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (567), Expect = 5e-63
 Identities = 115/278 (41%), Positives = 173/278 (62%), Gaps = 2/278 (0%)

Query: 13  MLDVAFLLVLVGGAAWFVWRMDDVIHYRWHWGRVLEGLVYVTPQGEWHAGPLARGLAGTV 72
           +LD   LL +     W  +R +  IHY+WHW R    L++ TP+ +       +GL  T+
Sbjct: 16  LLDGGLLLAIASLIGWLYYRSEVGIHYQWHW-REAWTLIF-TPRADGSLPYFLQGLGATL 73

Query: 73  RLSLWAMLAALLLGTVAGLLRTRRRLLARLLAGTYVDSVRNLPALVLIFVMYFFISSLVL 132
           RLSLW M+ AL+LG++ G+ R+++    RL A  +V  VRN+P LV +F+ YFFIS+ ++
Sbjct: 74  RLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLI 133

Query: 133 PALGLEESVRGLPPGGRAVVGWLFAPVEQLSAFLSAVVTLAIYEGAYISEIVRAGIESVP 192
           P LGL+E +R        ++ WLF P       LS V+ + +   AYI+EIVRAG+ ++P
Sbjct: 134 PLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIP 193

Query: 193 RGQWDASSSFGLGPVQQMRHVILPQALRHAVPPLAGQFISIIKDSAIVSVISVPELTFQG 252
           +GQW+A+ S GL    + R+VI PQ L    P LAGQ IS+IKD++I+S+IS+ ELTF G
Sbjct: 194 QGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQELTFVG 253

Query: 253 MELMAATYQTFEIWTTIALLYLVLTLGCSLVAERLERR 290
            E+  ++   FEIW  +   YLVL L  S++ +++E+R
Sbjct: 254 SEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291