Pairwise Alignments

Query, 545 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 516 a.a., ferredoxin-dependent glutamate synthase (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 39/210 (18%)

Query: 324 IRFATECKLDLLTIDGSGGGTGMSPWDMMETWGVPSILLHSKAHEYASILAARGEKVVDL 383
           I+FA +   D + +DG GGGTG +P    +   VP+I   ++A  Y     A G   V L
Sbjct: 337 IQFALDASADYIILDGRGGGTGAAPQIFRDHISVPTIPALARARRYLDQQGASGR--VTL 394

Query: 384 SFAGGFAKPSQIFKALALGAPYTKLICMGRAMMIPGFLGSNIEGVLKPENREKVCGNWDS 443
              GG   P    KA+ALGA    L     AM   G + +            ++C N ++
Sbjct: 395 IITGGLRLPMDFVKAMALGADGVAL--ANSAMQAIGCVAA------------RIC-NTNN 439

Query: 444 LPKTVSELGSTAEEIFAGYHDVQQKLGAEAMKTLPYGAIAMWTMLDKLGAGVQQLMAGAR 503
            P  ++   +          D++Q+L  +          +   + + LGA  + +   AR
Sbjct: 440 CPAGIATQNA----------DLRQRLNIDK---------SAQQLANFLGASTELMQVMAR 480

Query: 504 ---KFRLDQIAREDIASGNRETERETGIPF 530
                RL     +D+A+ + E  R +GI +
Sbjct: 481 ACGHHRLQDFTLDDLATWHSEMARLSGISY 510