Pairwise Alignments

Query, 281 a.a., nitrogen fixation protein nifU (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 149 a.a., FeS cluster assembly scaffold IscU from Herbaspirillum seropedicae SmR1

 Score =  122 bits (305), Expect = 6e-33
 Identities = 63/133 (47%), Positives = 91/133 (68%), Gaps = 8/133 (6%)

Query: 4   YTDKVREHFLNPRNVGSLDDAN---AIGEVGSLACGDALKLYLKIDDEGRIQDARFQTFG 60
           Y+DK+ +H+ NPRNVGS D  +   A G VG+ ACGD +KL +K+D  G I+DA+F+T+G
Sbjct: 3   YSDKLMDHYENPRNVGSFDKDDTSVATGMVGAPACGDVMKLQIKVDHNGIIEDAKFKTYG 62

Query: 61  CASAIASSSALTELIKGMLVEDALKISNKDIAAHLGGLPKEKMHCSVMGQEALEAAIRNW 120
           C SAIASSS +TE +KG  ++ AL I N  IA  L  LP  K+HCS++ ++A++AA+ ++
Sbjct: 63  CGSAIASSSLVTEWLKGRTLDQALDIKNTAIADEL-ALPPVKIHCSILAEDAIKAAVADY 121

Query: 121 RGE----PAVEHA 129
           R      P V+ A
Sbjct: 122 RSRHDAAPEVQQA 134