Pairwise Alignments

Query, 561 a.a., sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 476 a.a., chemotaxis protein CheY from Azospirillum brasilense Sp245

 Score =  233 bits (595), Expect = 1e-65
 Identities = 144/372 (38%), Positives = 211/372 (56%), Gaps = 9/372 (2%)

Query: 4   VLVIDGDPAFAQLVADFAAGLGHTSRHAPTLAEGL--LAATEADVIYLAASLPDGCGLEA 61
           +LV+D +      ++      G     A +  EG   L    A+VI L  +LP   GL+ 
Sbjct: 9   ILVVDDEEGICSFLSRALERRGWRVEVAGSAEEGARTLERIHAEVIILDVALPGRSGLDW 68

Query: 62  LAGLRALPSAPEVIVTGAAGNPDTAEKAIRGGAWEWLCKPAPVDRVVLPLLRALDY---- 117
           L  L A   A EVI+  A  + DTA  A+R GA +++ KP  V++++  + R ++     
Sbjct: 69  LKELMAGGYAGEVILVTAFADMDTAIDALRSGAADFVLKPFRVEQILNSIDRCVERTRLT 128

Query: 118 RDRPPDRRGPSILKHA---IVGSSRGLRRCLDDVAEAAASDAATLIVGETGVGKELFARA 174
           R+    RR  S   +    IVG S  + R    V   A + +  LI GE+GVGKEL ARA
Sbjct: 129 RENYVLRRQLSKKDNGRDEIVGRSDAMMRLRSLVQRVAPTPSTVLIQGESGVGKELVARA 188

Query: 175 VHENSHRADSPFITVDCASLPRTLAGSILFGHRKGAFTGADANRDGLVLQAHRGTLFLDE 234
           +H+ S RAD PF+ V+CA++   L  + LFGH +GAFTGA   R GL   AH GTLFLDE
Sbjct: 189 LHDLSPRADRPFVAVNCAAISADLIEAELFGHARGAFTGAKDARKGLFYYAHGGTLFLDE 248

Query: 235 VGELPLATQKMFLRVLQEQRFRAVGGRSEITSDFRLICATNRNLEAMSDKGLFRSDLLFR 294
           +GEL L  Q   LRVL+E+R R VG   E+  D R++ ATNR+L+A +  G FR DL +R
Sbjct: 249 IGELSLTLQSKLLRVLEERRIRPVGSEQEVPVDVRVVTATNRDLKAEAAAGRFRPDLFYR 308

Query: 295 MRTVVISIPPLRERPDDILALTGHYLARICKKYGLPAKQVSPDLHEALRAYRWPGNVREL 354
           +  + ++IPPLR+R  D+  L   ++  +  +  +P   ++P++  AL  + WPGNVREL
Sbjct: 309 LEVMTLTIPPLRQRAVDVPELAALFMRFLPVRLAVPPLTLTPEVTRALMCHSWPGNVREL 368

Query: 355 VHTLERAVLAAQ 366
            + +ER++L  +
Sbjct: 369 RNFVERSLLLGE 380