Pairwise Alignments

Query, 561 a.a., sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 481 a.a., chemotaxis protein CheY from Azospirillum brasilense Sp245

 Score =  243 bits (620), Expect = 1e-68
 Identities = 146/373 (39%), Positives = 210/373 (56%), Gaps = 9/373 (2%)

Query: 2   AHVLVIDGDPAFAQLVADFAAGLGH---TSRHAPTLAEGLLAATEADVIYLAASLPDGCG 58
           A +LV D D A   ++    A LGH   T+ +A TL   + A  + D+I     +PD  G
Sbjct: 4   ATILVADDDRAIRTVLTQALARLGHEVRTTGNASTLWRWV-ADGQGDLIITDVVMPDENG 62

Query: 59  LEALAGLRALPSAPEVIVTGAAGNPDTAEKAIRGGAWEWLCKPAPVDRVVLPLLRALDYR 118
           L+ +  ++ +     +IV  A     TA KA   GA+E+L KP  +  +V  + RAL+  
Sbjct: 63  LDLIPRIKKIRPDLRIIVMSAQNTLITAVKAAERGAFEYLPKPFDLKELVSVVERALNSN 122

Query: 119 DRP---PDRRGPSILKHAIVGSSRGLRRCLDDVAEAAASDAATLIVGETGVGKELFARAV 175
             P   P   G +  +  ++G S  ++     +A    +D    I GE+G GKEL ARA+
Sbjct: 123 TPPAALPADAGEADEQLPLIGRSPAMQEIYRVLARLMGTDLTVTITGESGTGKELVARAL 182

Query: 176 HENSHRADSPFITVDCASLPRTLAGSILFGHRKGAFTGADANRDGLVLQAHRGTLFLDEV 235
           H+   R + PF+ ++ A++PR L  S LFGH KGAFTGA     G   QA  GTLFLDE+
Sbjct: 183 HDYGKRRNGPFVAINMAAIPRELIESELFGHEKGAFTGATNRSTGRFEQAQGGTLFLDEI 242

Query: 236 GELPLATQKMFLRVLQEQRFRAVGGRSEITSDFRLICATNRNLEAMSDKGLFRSDLLFRM 295
           G++PL  Q   LRVLQE  +  VGGR+ I +D R++ AT+R+L  +  +GLFR DL +R+
Sbjct: 243 GDMPLEAQTRLLRVLQEGEYTTVGGRTPIKTDVRIVAATHRDLRTLIRQGLFREDLFYRL 302

Query: 296 RTVVISIPPLRERPDDILALTGHYLARICKKYGLPAKQVSPDLHEALRAYRWPGNVRELV 355
             V I +PPLRER +D+  L  H+L + C   GLP K +     + L+ YRWPGNVREL 
Sbjct: 303 CVVPIRLPPLRERTEDVPLLVRHFLNQ-CSAQGLPVKSIDQPAMDRLKRYRWPGNVRELE 361

Query: 356 HTLER-AVLAAQD 367
           + + R A L +Q+
Sbjct: 362 NLVRRLAALYSQE 374