Pairwise Alignments

Query, 561 a.a., sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 488 a.a., AAA-family response regulator tacA from Caulobacter crescentus NA1000

 Score =  234 bits (598), Expect = 4e-66
 Identities = 150/377 (39%), Positives = 199/377 (52%), Gaps = 10/377 (2%)

Query: 4   VLVIDGDPAFAQLVADFAAGLGHTSRHAP---TLAEGLLAATEADVIYLAASLPDGCGLE 60
           VLV+D DP   +L+       G    HA         L +   ADVI L   +P   G +
Sbjct: 5   VLVVDDDPTQRRLIQAVLERDGFAVSHAEGGDAAIAHLTSGAPADVILLDLVMPGLNGQD 64

Query: 61  ALAGLRALPSAPEVIVTGAAGNPDTAEKAIRGGAWEWLCKPAPVDRVVLPLLRALDYRD- 119
           AL  +RA      VIV  A+G  DT  KA++ GA ++  KPA  +R+ + +  AL   D 
Sbjct: 65  ALKEMRARGFNQPVIVLTASGGVDTVVKAMQAGACDFFIKPASPERITVSIRNALSMGDL 124

Query: 120 -----RPPDRRGPSILKHAIVGSSRGLRRCLDDVAEAAASDAATLIVGETGVGKELFARA 174
                R   R G       ++G+S  +         AA S    LI GE+GVGKEL ARA
Sbjct: 125 KGEVERLTKRAGGKTTFADLIGASPVMTMVKRMGERAAKSGIPVLITGESGVGKELIARA 184

Query: 175 VHENSHRADSPFITVDCASLPRTLAGSILFGHRKGAFTGADANRDGLVLQAHRGTLFLDE 234
           VH +S RA  PF+ V+C ++P  L  SILFGH KG+FTGA     G   +A  GTLFLDE
Sbjct: 185 VHGSSDRAGKPFVAVNCGAIPENLVESILFGHEKGSFTGATDKHLGKFKEADGGTLFLDE 244

Query: 235 VGELPLATQKMFLRVLQEQRFRAVGGRSEITSDFRLICATNRNLEAMSDKGLFRSDLLFR 294
           VGELPL  Q   LR LQE     +G +  I  D R++ ATNR+L+     G FR DL +R
Sbjct: 245 VGELPLDMQVKLLRALQEGEIDPIGSKRSIKVDVRIVSATNRDLQQAVSGGRFREDLFYR 304

Query: 295 MRTVVISIPPLRERPDDILALTGHYLARICKKYGLPAKQVSPDLHEALRAYRWPGNVREL 354
           +    I  P LRER +DI AL   ++ R   + G      SP+  + L ++ WPGNVR+L
Sbjct: 305 LNVFPIEAPSLRERREDIPALVEAFIRRFNVEEGKRVIGASPETMQLLTSFDWPGNVRQL 364

Query: 355 VHTLERAVLAAQDAPKL 371
            +T+ RA++ A DAP L
Sbjct: 365 ENTVYRAIVLA-DAPYL 380